Entry information : SpolPrx12 ( Spipo0G0187500)
Entry ID 13212
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status partial
Reviewer Catherine Mathe
Last annotation changes 2016-02-26 (Catherine Mathe)
Peroxidase information: SpolPrx12 ( Spipo0G0187500)
Name (synonym) SpolPrx12 ( Spipo0G0187500)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx12
start..stop
S start..stop
SpolPrx30 371 6e-134 1..190 3..192
SpolPrx[P]43 309 1e-109 17..190 1..174
SpolPrx18 309 2e-107 1..186 136..312
SpolPrx05 272 1e-92 1..189 135..325
Literature and cross-references SpolPrx12 ( Spipo0G0187500)
DNA ref. Phytozome 12:   pseudo0 (11501553..11502246)
Cluster/Prediction ref. Phytozome Gene 12:   31509311
Protein sequence: SpolPrx12 ( Spipo0G0187500)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   190
PWM (Da):   %s   20577.33  
PI (pH):   %s   9.16
Sequence
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Send to Peroxiscan
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SKGIFYEVPS GRRDGKVSLS SETFANLPPP SFNLDQLTQS FARKGLTQED LVTLSGAHSI GKADCSSFSN RLYNFNSTVQ TDPSLDPAYA AQLKQKCPPG TTGSSVPMDP PSPEVLDSSY 
YKGVIENRGL FTSDQALMSS PVTARQVRAN RNNNFLFNKN FAAAMVKMGK IDVLTGTAGE IRLNCRVVNK * 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exon 1 and 2 are missing due to N in the sequence.
DNA
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AGCAAGGGTA TCTTCTATGA AGTGCCCTCC GGAAGAAGGG ATGGAAAAGT CTCTTTGAGC TCGGAGACGT TCGCGAACTT GCCTCCACCC TCCTTTAATC TCGATCAGCT TACTCAGAGT  TTTGCTAGAA AGGGCCTGAC ACAGGAGGAC TTGGTCACCC TCTCTGGTGC GTACATATGT GATGCCATCG ATCGTCTAGG CTGCTTCCAT TCAACTTATA AGTAAACAAT ATATCAACTA  CCTACCTATC GTCACTAAGA GATGATATCC CGTGGTGTTG TAACCAGGTG CACATTCCAT TGGGAAAGCT GACTGTTCCT CGTTCAGCAA CAGGCTCTAC AACTTTAACT CAACCGTGCA  GACGGACCCG AGCCTGGACC CAGCCTACGC AGCCCAGCTG AAGCAAAAGT GTCCCCCGGG CACCACGGGT TCGAGCGTGC CCATGGACCC TCCCTCTCCC GAGGTCCTCG ATTCCAGCTA  CTACAAAGGC GTTATCGAGA ACCGTGGCCT GTTCACCTCT GATCAGGCGC TCATGTCCAG TCCGGTAACG GCGAGGCAAG TGAGGGCCAA CCGGAACAAC AATTTTCTTT TCAACAAGAA 
TTTCGCGGCG GCAATGGTGA AGATGGGTAA GATTGACGTC CTCACTGGGA CCGCAGGCGA GATCCGCTTG AACTGTAGGG TCGTCAACAA ATGA 

Retrieve as FASTA  
CDS
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AGCAAGGGTA TCTTCTATGA AGTGCCCTCC GGAAGAAGGG ATGGAAAAGT CTCTTTGAGC TCGGAGACGT TCGCGAACTT GCCTCCACCC TCCTTTAATC TCGATCAGCT TACTCAGAGT  TTTGCTAGAA AGGGCCTGAC ACAGGAGGAC TTGGTCACCC TCTCTGGTGC ACATTCCATT GGGAAAGCTG ACTGTTCCTC GTTCAGCAAC AGGCTCTACA ACTTTAACTC AACCGTGCAG  ACGGACCCGA GCCTGGACCC AGCCTACGCA GCCCAGCTGA AGCAAAAGTG TCCCCCGGGC ACCACGGGTT CGAGCGTGCC CATGGACCCT CCCTCTCCCG AGGTCCTCGA TTCCAGCTAC  TACAAAGGCG TTATCGAGAA CCGTGGCCTG TTCACCTCTG ATCAGGCGCT CATGTCCAGT CCGGTAACGG CGAGGCAAGT GAGGGCCAAC CGGAACAACA ATTTTCTTTT CAACAAGAAT 
TTCGCGGCGG CAATGGTGAA GATGGGTAAG ATTGACGTCC TCACTGGGAC CGCAGGCGAG ATCCGCTTGA ACTGTAGGGT CGTCAACAAA TGA 

Retrieve as FASTA