Entry information : SpolPrx15 (Spipo18G0027200)
Entry ID 13215
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-26 (Catherine Mathe)
Peroxidase information: SpolPrx15 (Spipo18G0027200)
Name (synonym) SpolPrx15 (Spipo18G0027200)
Class Class III peroxidase    [Orthogroup: Prx183]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx15
start..stop
S start..stop
SpolPrx11 454 2e-162 1..316 1..319
SpolPrx13 426 2e-151 17..316 20..320
SpolPrx27 410 3e-145 19..316 20..313
VvPrx20 374 1e-130 13..316 13..317
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2126925..2127134 210 N° 2 2126632..2126820 189 N° 3 2125984..2126535 552  
complement(join(2125984..2126535,2126632..2126820,2126925..2127134))


exon

Literature and cross-references SpolPrx15 (Spipo18G0027200)
DNA ref. Phytozome 12:   pseudo18 (2127134..2125984)
Cluster/Prediction ref. Phytozome Gene 12:   31518546
Protein sequence: SpolPrx15 (Spipo18G0027200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (293)
PWM (Da):   %s   33689.66 (31231.3) Transmb domain:   %s   i5-27o
PI (pH):   %s   5.26 (5.01) Peptide Signal:   %s   cut: 24 range:24-316
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATLSVSLGSLVVLLFVFTSHAQLTANFYSSSCPNLETIVQTAVQTAVGNDPRVTAFFLRLFFHDCFVNGCDASVLLVDTATFQGEQTAPQNRNLGGQDVIEGIKSAVEASCNGTVSCADILALATRDGVVQSGGPSWTVQLGRRDATTASRSAAASNLPFSGFNLSNLITNFANKGLNLQELVALSGAHTVGFAPCRAFRRRIYNDSNIDPDFAKATQANCPTSGGDDNLSPIDVNTWTVFDNAYYQNLVSFRGLFHSDQELFNNGPADSIVQSYVASSSNFFRDFAAAMVKLGNISPLIGSSGEIRRVCSRVN*

Retrieve as FASTA  
Remarks
Promoter
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Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAAGGGATTT TCTTTGATCT CTTGTAACGC TGCGTCATAA TCTCACTCCG TACGCATGTC GGCATTTTCA GATTTTCGGA TCTCGGCGAA GCAGACGTTC TTCCTCCACA GGACTTGCTC  GCCACGCTGG GAGATCACCA TTTGCGAGAT GCCGTCGTCC CTTTAAGAAC CCTCGATCTC TATCGGTGCG GGTCGCTCTT GCCGTTCGAT CACCGCCAAA CTGACTTGCC TTGAGAGCAG  GGTGACACGC GAGATCTACC CATCGGCAAT GTCAACATCA TTGCCAACTA CTAATACTCG TCAAGAACAA GACAATAAAT AGAGATCTGG AAAGTGGTCG AGGAAGAAAT TTGACTAGGA  AGACGGTCAG ACATGCTGAC TTTTCCACGC GGCGGGTACC CCACAGTCAA CAAGGTGGGG GCAGCGGGTC GGTCGTGTCT TAATCAATCA TGCTCCCAAG ACCTTCGAAA ACTGATAGCC  CTGTTATCTC TTGTGAAGGG TGGAAGGAGA TATTCGCCAG TGCAAAGAAA TCTGTTCAAG TTGAGGATTG CTGGGCAAAT GTAGCCATCG GGATTAATGA CTATTCCCGA GATGCAAGTT  GTGCAAATTT CAAGAGAAAA TAGTCCTCAC TGGACCGTAA TGAAGTCCAG GCTCTGCTTC GGCCCTCCAT ATGCACACAC ACCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCCT  TGATCGCTTT CCCTCTATCC TTCTAGTTAT TCTACTTATC TAGCTTAAAC TTACCCCTTT GTACTAGCTC GGTTCTATTT ATCCACTCAC TTACCTTTCA TTCTTTCTGG AAGGGGAAGC  ACACGCTTAG GCGGTAGTCA AGTAGAAAAA CTGATGGGTA GACAGAAGAT GGGTGAATAG ATAGAACGGG GAAGAGGGAA AGACTAGAAG AGTGAGAGAG AGGATTTTTT TGTTAGGTGA  ACAATCACAA GAAATATTAT TACGAAAAAC AATATTTTTG AAAAAGTAGT TTATTAATCA ATTTTATCAT TGCCGTCAGA TCGTCTGTCG ATGGCGATTG ATGTTGGTAT ATCCTCTACA  TACCTTTGCG GACCCATCAT GGTTATTATT CTTGTCTAAA TACTTGCAGA ATTTTCATAT TATAGAGGCA AAAGAGTAAA AATATTTTTA TATATTTGTG GAATAAGTTT TCACGAAATA  TTTATAAAAA ATATGAAAGC CATATTAGGA CATTTGGAAA TATTACGATG GTAGAATTAT ACTTGCAAGC ACAGTTTTTC ATCGTAAATA TTACCACAGT GAGTTCTTAA GGCATAATTG  TGTACCCATG AAAATATCTT TCAAGTTTCT ATTTTTATTG CCAACAGGAG TGGGGCTGCC CTGTATGACT CGTGATCGTT ACATTCCAAC GAAATAAAGA CCGGAACAAG TCTTGTGGAA  GGGGTGAATG GGCCGTAGGA CCCACGTTTG ACTGTTGACC GGTTGAAAAC CCAGATGTAA TGAGAACGTC GTCAGAATGC GCTTTCAGTA TCCGATTCGC GGCACGAGGA ATCCTCGAAT  GCGATGTCAA TGAAAGAATA ACCGTGGAAC TCTTGCTCTA TGATAGTGAA ACCTGTAATG ATACCCCAAG AGAATGTACG TGATCTGCTA AAAGACAGTT GCTTGACGCC GTAAAAGGTC  AGAAAAACTG GAGGGAGGGC CATTGATGAC AGCGGATAAC AGCACTAATC TCTCCCCGCC CCTCCCCCCC TTATTTCAAT GTTTCTGTGT CTCTGTCTTT CTCTCTGTCC TCTCTATCTC  TCTGCATGGG AACATCAATG TCCGTCGTTT CCGCTGCCGA CTGTCGAAAA ATAACGCAGA GCAGTGAAGT CGATGAGCCC TCCCTCGCTC TATATAAGGG GCACCAGTCC CGAAAGAACT  TCACCAGGAC ACACTTCCGC AAGTGAGACA TTTACGTTTA GAGAGTGTGT GAGAGATAGA GGACTCTTTC CGACGCTGAA ATGGCGGCCA CACTCAGCGT CTCTCTTGGC TCCCTCGTCG  TCCTCCTGTT CGTGTTCACA TCACACGCGC AGCTGACGGC GAACTTCTAC TCCTCGAGCT GCCCCAACCT GGAGACGATC GTGCAAACTG CGGTGCAGAC GGCCGTCGGG AACGACCCCC  GCGTGACCGC CTTCTTTCTC CGCCTCTTCT TCCACGACTG CTTCGTCAAC GTAAGTGCGC GTACTACAGA ACATACTCTT GTAGATAACA GACAGCCGGT CTCTCATCAC GCCGTCGCAA  CGGTTCTAAT GCCGCGGCAA GTGTGATCAT GCAGGGCTGC GACGCGTCGG TGCTCCTGGT CGATACCGCA ACGTTCCAAG GCGAGCAGAC CGCCCCCCAA AACAGAAACC TTGGAGGCCA  GGACGTCATC GAGGGCATCA AGTCCGCCGT CGAGGCATCG TGCAACGGCA CCGTTTCGTG CGCCGACATC CTGGCCCTTG CCACCAGGGA CGGCGTCGTC CAGGTTAATT CTTCGCCTCG  ACATCGTTGG GACCGTCCCG TCGGTTCTCC GTCGACCGAA TTCACTATCT AACCAGGAGA GGCTGCCTCC TCCACGCAGA GCGGAGGACC CTCGTGGACG GTGCAGCTGG GGCGACGGGA  CGCCACAACG GCCAGTCGGA GCGCAGCCGC TAGCAACCTC CCTTTTTCCG GTTTCAATCT CTCCAACCTC ATCACCAACT TCGCCAACAA GGGCCTGAAC TTGCAGGAAC TAGTCGCCCT  CTCCGGCGCG CACACCGTCG GCTTCGCCCC CTGCCGCGCC TTCCGCCGAC GCATCTACAA CGATTCCAAC ATTGATCCCG ACTTCGCTAA AGCCACCCAG GCCAACTGCC CCACTAGCGG  TGGCGACGAT AACCTCTCGC CGATCGACGT CAACACCTGG ACTGTATTCG ACAATGCCTA CTACCAAAAC CTCGTGTCCT TCCGGGGTCT CTTTCACTCT GATCAAGAGC TCTTCAACAA  CGGCCCCGCG GATTCCATCG TCCAAAGCTA CGTGGCCAGC AGCTCCAACT TCTTCAGGGA CTTCGCGGCG GCGATGGTAA AGTTGGGGAA CATCAGCCCC CTCATCGGCT CCAGCGGGGA 
GATCAGGCGG GTCTGCAGCA GGGTGAACTA A 

Retrieve as FASTA  
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCCACACTCAGCGTCTCTCTTGGCTCCCTCGTCGTCCTCCTGTTCGTGTTCACATCACACGCGCAGCTGACGGCGAACTTCTACTCCTCGAGCTGCCCCAACCTGGAGACGATC
GTGCAAACTGCGGTGCAGACGGCCGTCGGGAACGACCCCCGCGTGACCGCCTTCTTTCTCCGCCTCTTCTTCCACGACTGCTTCGTCAAC
GTAAGTGCGCGTACTACAGAACATACTCTT
GTAGATAACAGACAGCCGGTCTCTCATCACGCCGTCGCAACGGTTCTAATGCCGCGGCAAGTGTGATCATGCAGGGCTGCGACGCGTCGGTGCTCCTGGTCGATACCGCAACGTTCCAAG
GCGAGCAGACCGCCCCCCAAAACAGAAACCTTGGAGGCCAGGACGTCATCGAGGGCATCAAGTCCGCCGTCGAGGCATCGTGCAACGGCACCGTTTCGTGCGCCGACATCCTGGCCCTTG
CCACCAGGGACGGCGTCGTCCAG
GTTAATTCTTCGCCTCGACATCGTTGGGACCGTCCCGTCGGTTCTCCGTCGACCGAATTCACTATCTAACCAGGAGAGGCTGCCTCCTCCACGCAGA
GCGGAGGACCCTCGTGGACGGTGCAGCTGGGGCGACGGGACGCCACAACGGCCAGTCGGAGCGCAGCCGCTAGCAACCTCCCTTTTTCCGGTTTCAATCTCTCCAACCTCATCACCAACT
TCGCCAACAAGGGCCTGAACTTGCAGGAACTAGTCGCCCTCTCCGGCGCGCACACCGTCGGCTTCGCCCCCTGCCGCGCCTTCCGCCGACGCATCTACAACGATTCCAACATTGATCCCG
ACTTCGCTAAAGCCACCCAGGCCAACTGCCCCACTAGCGGTGGCGACGATAACCTCTCGCCGATCGACGTCAACACCTGGACTGTATTCGACAATGCCTACTACCAAAACCTCGTGTCCT
TCCGGGGTCTCTTTCACTCTGATCAAGAGCTCTTCAACAACGGCCCCGCGGATTCCATCGTCCAAAGCTACGTGGCCAGCAGCTCCAACTTCTTCAGGGACTTCGCGGCGGCGATGGTAA
AGTTGGGGAACATCAGCCCCCTCATCGGCTCCAGCGGGGAGATCAGGCGGGTCTGCAGCAGGGTGAACTAA

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCCACACTCAGCGTCTCTCTTGGCTCCCTCGTCGTCCTCCTGTTCGTGTTCACATCACACGCGCAGCTGACGGCGAACTTCTACTCCTCGAGCTGCCCCAACCTGGAGACGATC
GTGCAAACTGCGGTGCAGACGGCCGTCGGGAACGACCCCCGCGTGACCGCCTTCTTTCTCCGCCTCTTCTTCCACGACTGCTTCGTCAAC
GGCTGCGACGCGTCGGTGCTCCTGGTCGAT
ACCGCAACGTTCCAAGGCGAGCAGACCGCCCCCCAAAACAGAAACCTTGGAGGCCAGGACGTCATCGAGGGCATCAAGTCCGCCGTCGAGGCATCGTGCAACGGCACCGTTTCGTGCGCC
GACATCCTGGCCCTTGCCACCAGGGACGGCGTCGTCCAG
AGCGGAGGACCCTCGTGGACGGTGCAGCTGGGGCGACGGGACGCCACAACGGCCAGTCGGAGCGCAGCCGCTAGCAACCTC
CCTTTTTCCGGTTTCAATCTCTCCAACCTCATCACCAACTTCGCCAACAAGGGCCTGAACTTGCAGGAACTAGTCGCCCTCTCCGGCGCGCACACCGTCGGCTTCGCCCCCTGCCGCGCC
TTCCGCCGACGCATCTACAACGATTCCAACATTGATCCCGACTTCGCTAAAGCCACCCAGGCCAACTGCCCCACTAGCGGTGGCGACGATAACCTCTCGCCGATCGACGTCAACACCTGG
ACTGTATTCGACAATGCCTACTACCAAAACCTCGTGTCCTTCCGGGGTCTCTTTCACTCTGATCAAGAGCTCTTCAACAACGGCCCCGCGGATTCCATCGTCCAAAGCTACGTGGCCAGC
AGCTCCAACTTCTTCAGGGACTTCGCGGCGGCGATGGTAAAGTTGGGGAACATCAGCCCCCTCATCGGCTCCAGCGGGGAGATCAGGCGGGTCTGCAGCAGGGTGAACTAA

Retrieve as FASTA