Entry information : SpolPrx17 (Spipo6G0016400)
Entry ID 13217
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-17 (Christophe Dunand)
Peroxidase information: SpolPrx17 (Spipo6G0016400)
Name (synonym) SpolPrx17 (Spipo6G0016400)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx17
start..stop
S start..stop
SpolPrx38 477 6e-172 1..246 72..317
MePrx80 328 8e-113 1..244 78..321
AcoPrx60 322 8e-111 1..246 66..312
EgrPrx153 322 9e-111 1..246 61..304
Literature and cross-references SpolPrx17 (Spipo6G0016400)
Protein sequence: SpolPrx17 (Spipo6G0016400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   31498.82  
PI (pH):   %s   8.67
Sequence
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Send to Peroxiscan
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GCDGSVLLDS TPGKPPERRH LANHPSLRGF EVIDEAKAIL ESHCPNTVSC ADVLAFAARD AAYFTGGFFD ELPGGRRDGR VSLESEVPGN IPPPSFNAEQ LKENFARKGP SVDEMVTLSG  AHSIGVSHCS SFSSRLYGFN ATHPQDPSMD PDLAAFLKSR CPRRRGDDRR GPTVPLDLAT PHHLDIQYYR NLKKGRGLLT SDQTLWGSSR TAKLVAANTK NPHRWQEKYA VAMVHKGSID 
VLTGHKARSG GTVGPSITND TYFSSRICGL YELCQIRPRA LRSLGEVSH* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exon 1 in missing.
DNA
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GGATGCGATG GTTCGGTTCT CCTGGATTCT ACCCCCGGAA AACCCCCGGA GAGGCGGCAT CTGGCGAACC ACCCGAGCCT GCGCGGTTTC GAGGTGATCG ACGAAGCCAA GGCTATCCTG  GAATCTCACT GCCCTAACAC GGTGTCATGC GCCGATGTCC TGGCCTTCGC AGCCCGCGAC GCTGCGTACT TCACGGGGGG CTTCTTTGAC GAACTTCCGG GGGGTAGGCG AGACGGGAGG  GTGTCATTGG AGTCTGAGGT CCCGGGCAAT ATTCCTCCAC CCAGCTTCAA CGCTGAGCAG CTCAAAGAGA ACTTCGCGAG GAAAGGGCCG TCGGTGGACG AGATGGTGAC CCTCTCCGGG  GCCCACTCCA TCGGCGTCTC CCACTGCTCG TCCTTCTCTA GCAGGCTGTA CGGCTTCAAC GCCACCCACC CACAGGATCC CTCCATGGAT CCCGACCTCG CGGCGTTCTT GAAGAGCAGG  TGCCCGCGTC GGCGTGGCGA CGACCGGCGC GGCCCCACTG TTCCCCTGGA CCTGGCGACA CCCCACCATC TGGATATCCA GTACTACAGA AACCTCAAGA AAGGGAGGGG TTTGTTGACC  TCCGACCAGA CGCTGTGGGG CAGCTCCAGG ACGGCAAAGT TGGTTGCGGC CAACACGAAG AATCCACACC GGTGGCAGGA GAAGTACGCA GTCGCCATGG TGCACAAGGG ATCCATCGAC  GTGCTCACCG GGCATAAGGC GAGATCAGGC GGCACTGTAG GGCCGTCAAT CACTAATGAC ACTTATTTTT CGTCCCGGAT TTGTGGACTC TATGAACTGT GCCAAATACG GCCCAGGGCG 
CTCCGATCGC TGGGAGAAGT TTCTCATTAA 

Retrieve as FASTA  
CDS
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GGATGCGATG GTTCGGTTCT CCTGGATTCT ACCCCCGGAA AACCCCCGGA GAGGCGGCAT CTGGCGAACC ACCCGAGCCT GCGCGGTTTC GAGGTGATCG ACGAAGCCAA GGCTATCCTG  GAATCTCACT GCCCTAACAC GGTGTCATGC GCCGATGTCC TGGCCTTCGC AGCCCGCGAC GCTGCGTACT TCACGGGGGG CTTCTTTGAC GAACTTCCGG GGGGTAGGCG AGACGGGAGG  GTGTCATTGG AGTCTGAGGT CCCGGGCAAT ATTCCTCCAC CCAGCTTCAA CGCTGAGCAG CTCAAAGAGA ACTTCGCGAG GAAAGGGCCG TCGGTGGACG AGATGGTGAC CCTCTCCGGG  GCCCACTCCA TCGGCGTCTC CCACTGCTCG TCCTTCTCTA GCAGGCTGTA CGGCTTCAAC GCCACCCACC CACAGGATCC CTCCATGGAT CCCGACCTCG CGGCGTTCTT GAAGAGCAGG  TGCCCGCGTC GGCGTGGCGA CGACCGGCGC GGCCCCACTG TTCCCCTGGA CCTGGCGACA CCCCACCATC TGGATATCCA GTACTACAGA AACCTCAAGA AAGGGAGGGG TTTGTTGACC  TCCGACCAGA CGCTGTGGGG CAGCTCCAGG ACGGCAAAGT TGGTTGCGGC CAACACGAAG AATCCACACC GGTGGCAGGA GAAGTACGCA GTCGCCATGG TGCACAAGGG ATCCATCGAC  GTGCTCACCG GGCATAAGGC GAGATCAGGC GGCACTGTAG GGCCGTCAAT CACTAATGAC ACTTATTTTT CGTCCCGGAT TTGTGGACTC TATGAACTGT GCCAAATACG GCCCAGGGCG 
CTCCGATCGC TGGGAGAAGT TTCTCATTAA 

Retrieve as FASTA