Entry information : SpolPrx23 (Spipo6G0016500)
Entry ID 13224
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-06-09 (Christophe Dunand)
Peroxidase information: SpolPrx23 (Spipo6G0016500)
Name (synonym) SpolPrx23 (Spipo6G0016500)
Class Class III peroxidase    [Orthogroup: Prx184]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx23
start..stop
S start..stop
SpolPrx19 559 0 5..293 1..289
SpolPrx24 513 0 1..293 1..293
SpolPrx38 371 9e-130 9..293 7..298
CsaPrx38 329 6e-113 9..292 20..308
Literature and cross-references SpolPrx23 (Spipo6G0016500)
Protein sequence: SpolPrx23 (Spipo6G0016500)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   308 (283)
PWM (Da):   %s   33298.71 (30652.3)  
PI (pH):   %s   7.68 (7.42) Peptide Signal:   %s   cut: 25 range:25-307
Sequence
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MLRTMLVSCI AFLLALQAVA PVAASHSLKE GFYKRSCPQA QTVVRDVVSN ALATNKGIGA GLIRLHFHDC FVRGCDASVL LEGSDSERMH PANLNSLRGF EVVEQAKDLL ECQCPNTVSC  ADVLAFAARD AAEFLGGFRY QVPAGRRDGR VSRNSDADVL PPATATAEVL RERFANKGLS LEDMVALSGA HSLGVSHCPA FSDRLYNFNA THQQDPSLDA GLADYLKGRC PPPGTDRTTV 
SLDLATPNRL DVQYYRNLQK GRGLLTSDQT LWTSSLTADK VASFAEKPNA WAKSTRPPWC GWVLSTY* 

Retrieve as FASTA  
Remarks
Promoter
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Send to cis Analysis
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TAGGGCCGTC AATCACTAAT GACACTTATT TTTCGTCCCG GATTTGTGGA CTCTATGAAC TGTGCCAAAT ACGGCCCAGG GCGCTCCGAT CGCTGGGAGA AGTTTCTCAT TAACGATGAT  CAGTGGCACG GTTTGTCAAG CATCCGGCCT TGGTACCCTT GAATTCTGCG CAACTTACTG TTATTGTAAA GATCGTGTCA ACAAAGTTTT TAAGAATTCA AAGTAACGTT TCGCTTTTAA  TTTGGTGTTG TCGGATGCGA TAACTACACG CACTGTCAGA AAAGAAGAAT GTTAAGTATC GCATTTATAT GCCGTTATAA GAAAAAAAAA GGGCGAATCT GTTTTCTTGG GCAGCGTAAG  CGTAACTTTG TGGCTCCATA AATAAACATT GGAAATACTT TCATAGGAAT GGTCTCCTTG TTCCATGTCC TACGGAGCAG TTTGACGTTC AGCGGCTGCG CTTTTAGATG CCCGATTCTG  GGCGTCTCCT TTGAGAGTAA TACGTTCCCT CCATGTTCTC TTCTCTGGAA CAGAACTGTG AGGGAGGCGG AAGTCTTTGG TTTCGTTGAG AGATATCTAG CAACAAAGCC GGGCAGATAG  ACCCCCTTCT CGTTGCTAAG AGAGAGAAGC CCACCGGATG ACACATCTTT TATTCGTGGG AGGAGTCAGG ATCGAAGAAG CACTTTCATG GGCAGACCCT CGGAGAACCT CCTTGGCGGA  GAGAAAGACT TTCCTCATTC AGCTCTTTAA TTACAATGAT AGAGAATAAC ATGGGGTTAG GGCGACCACT CAGGGACAAG AGAACAACTG TCCCCAAAGT TTAAAACGGC TCATAGAAGT  AATCTCTCCC TTGAACTTTT CACCAATTGC CCCCTATGTA TCGGCCGTAG ATCAGGAATG ATCATTCTCC ACGCATCCCA ACAAGAGAGT ACTCCTAATC GTAAGACCTC ACCTGCCCGC  TTGGGTCTTC TAAAAATGGA CTAGGAAGCG AAATCCTACA TGCCTGTAAG GTGTGTTATG ATGGATTTTA AGTCCTGAGT GGCGGTTCCC TAGATATAAA AGAGAGTAAC CCTGCGTTTT  CTATCAACCC ATAGTCCTTC CTAAGCATAT CCTTCGCATG CACTGCAACT GCAGTTTGAG TAAAATGCAT AAAAAATATG GATTAGCTGT GACATTAATT AGCTGTGTCA AGGCCATTGA  ACTCCAATCA ATAATATTTA TCGCAAATAT TGAAACTCCA CCGAAAGGTA CAAACCCCCA ACGATTTAGA GTCTCTTTAA ATCCCCCAGT CGATGATCTA CCTAATCATT AAACCTTTCA  TGGGTGTCAA CGCCAGTCAG TTATAGTCAT CGACTATTCG AACACGTCTT TCTTCAATCT TCTATTCACG GCATTATTTT CCTGTCAGGT GAATCATCCG TGCAATTATA CCTCCACCTC  CAAGAACCTG AGAGCCACCC GAGGTGCATT CTTTCCTTCG GTTTTGCTCA TCTTTTCGAC TCCATGACGT AGTATTGCAC AATGTAAACT CTTAGGATTT CCTTGTTGTA CAAAAAAATT  GATCACGGTG AAGGAGCTTC AAAACCCTGC GGAACCAAAT ATGAGGAAAT GTGAACTCTT CACCAACAAT AATAACAGAA CGAACGTCGA GTTCAGATTG AATTATTATA ACTTGGACGA  TTCTACGACT ATTGAAATCA TTTGTCAAAG TACGAAGACA GAGATGGGAA CAAGTCAAGC TCCTCCGGCA CACGTTTTGT AACCCTCATT GCTGAAGCCC GGAAAGAAAA AGTCAAAAAG  CCCTACTCCA AGGTATCTAT AAACTAGCAT CCATCCAATG ATTAGGAGGT CACCCCACCT CTCGCCTGAC TCCTCTCATA GCCCATTTCT CCGAGCTCTT CGAATCTACA TAACCCTCGC  TCTCCTCTTC TTCGGAAGGA ACGCCCAGGA ACCGGGAAAC CCAGCACCGC AGGAAGAGAC TGAAGGGGAT TTGTTCAGCA ATGTTGCGGA CCATGTTGGT TTCGTGCATC GCGTTCCTGC  TGGCCCTCCA GGCCGTTGCT CCCGTAGCTG CCTCGCATTC TCTGAAGGAG GGGTTTTACA AGAGGAGCTG TCCCCAGGCA CAGACCGTCG TCAGAGACGT CGTGAGCAAC GCCCTCGCCA  CCAACAAGGG GATAGGCGCA GGGCTTATCA GGCTTCACTT CCACGACTGC TTCGTCAGGG TACGCCACTA TCGCCTCTCC TCTATCGTCC ATCCGTCATT CGTAATGGCT GCCAATTGGC  GACTGTTCCG ATAGCGTAAT CTTATACCCA CCGGACTTGT CGACGTCTGA CTCTCCTGCG TAAATTTGCG AACAGGGCTG TGACGCCTCC GTTCTGCTGG AAGGCAGCGA CTCGGAGAGG  ATGCATCCGG CCAACTTAAA CAGCCTTCGG GGTTTCGAGG TGGTCGAGCA GGCCAAGGAT CTCCTGGAAT GTCAGTGCCC CAATACGGTG TCATGCGCCG ACGTCCTGGC CTTCGCCGCC  CGCGACGCCG CGGAATTCTT AGGTGGTTTC CGCTACCAGG TCCCGGCGGG AAGGCGGGAC GGGAGGGTAT CCCGGAACTC CGACGCCGAC GTCCTTCCGC CGGCCACCGC TACTGCCGAG  GTTCTCCGTG AGAGGTTCGC GAACAAGGGG TTATCGCTAG AAGACATGGT GGCGCTCTCC GGCGCTCATT CTCTCGGCGT CTCCCACTGC CCGGCCTTCT CCGACAGGCT GTACAACTTC  AACGCCACCC ACCAGCAGGA TCCCTCCTTG GACGCCGGCC TTGCCGACTA CCTCAAGGGG CGGTGCCCGC CTCCGGGAAC CGACCGTACC ACCGTTTCCC TGGACCTCGC CACGCCTAAT  CGTCTGGACG TGCAGTACTA CAGAAACCTG CAGAAGGGGA GGGGGCTGTT AACCTCCGAC CAGACGCTGT GGACCAGCTC TCTCACGGCG GACAAGGTGG CGTCGTTCGC CGAGAAGCCC 
AACGCCTGGG CGAAAAGTAC GCGGCCGCCA TGGTGCGGAT GGGTGCTATC GACGTACTGA 

Retrieve as FASTA  
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGCGGA CCATGTTGGT TTCGTGCATC GCGTTCCTGC TGGCCCTCCA GGCCGTTGCT CCCGTAGCTG CCTCGCATTC TCTGAAGGAG GGGTTTTACA AGAGGAGCTG TCCCCAGGCA  CAGACCGTCG TCAGAGACGT CGTGAGCAAC GCCCTCGCCA CCAACAAGGG GATAGGCGCA GGGCTTATCA GGCTTCACTT CCACGACTGC TTCGTCAGGG TACGCCACTA TCGCCTCTCC  TCTATCGTCC ATCCGTCATT CGTAATGGCT GCCAATTGGC GACTGTTCCG ATAGCGTAAT CTTATACCCA CCGGACTTGT CGACGTCTGA CTCTCCTGCG TAAATTTGCG AACAGGGCTG  TGACGCCTCC GTTCTGCTGG AAGGCAGCGA CTCGGAGAGG ATGCATCCGG CCAACTTAAA CAGCCTTCGG GGTTTCGAGG TGGTCGAGCA GGCCAAGGAT CTCCTGGAAT GTCAGTGCCC  CAATACGGTG TCATGCGCCG ACGTCCTGGC CTTCGCCGCC CGCGACGCCG CGGAATTCTT AGGTGGTTTC CGCTACCAGG TCCCGGCGGG AAGGCGGGAC GGGAGGGTAT CCCGGAACTC  CGACGCCGAC GTCCTTCCGC CGGCCACCGC TACTGCCGAG GTTCTCCGTG AGAGGTTCGC GAACAAGGGG TTATCGCTAG AAGACATGGT GGCGCTCTCC GGCGCTCATT CTCTCGGCGT  CTCCCACTGC CCGGCCTTCT CCGACAGGCT GTACAACTTC AACGCCACCC ACCAGCAGGA TCCCTCCTTG GACGCCGGCC TTGCCGACTA CCTCAAGGGG CGGTGCCCGC CTCCGGGAAC  CGACCGTACC ACCGTTTCCC TGGACCTCGC CACGCCTAAT CGTCTGGACG TGCAGTACTA CAGAAACCTG CAGAAGGGGA GGGGGCTGTT AACCTCCGAC CAGACGCTGT GGACCAGCTC 
TCTCACGGCG GACAAGGTGG CGTCGTTCGC CGAGAAGCCC AACGCCTGGG CGAAAAGTAC GCGGCCGCCA TGGTGCGGAT GGGTGCTATC GACGTACTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGCGGA CCATGTTGGT TTCGTGCATC GCGTTCCTGC TGGCCCTCCA GGCCGTTGCT CCCGTAGCTG CCTCGCATTC TCTGAAGGAG GGGTTTTACA AGAGGAGCTG TCCCCAGGCA  CAGACCGTCG TCAGAGACGT CGTGAGCAAC GCCCTCGCCA CCAACAAGGG GATAGGCGCA GGGCTTATCA GGCTTCACTT CCACGACTGC TTCGTCAGGG GCTGTGACGC CTCCGTTCTG  CTGGAAGGCA GCGACTCGGA GAGGATGCAT CCGGCCAACT TAAACAGCCT TCGGGGTTTC GAGGTGGTCG AGCAGGCCAA GGATCTCCTG GAATGTCAGT GCCCCAATAC GGTGTCATGC  GCCGACGTCC TGGCCTTCGC CGCCCGCGAC GCCGCGGAAT TCTTAGGTGG TTTCCGCTAC CAGGTCCCGG CGGGAAGGCG GGACGGGAGG GTATCCCGGA ACTCCGACGC CGACGTCCTT  CCGCCGGCCA CCGCTACTGC CGAGGTTCTC CGTGAGAGGT TCGCGAACAA GGGGTTATCG CTAGAAGACA TGGTGGCGCT CTCCGGCGCT CATTCTCTCG GCGTCTCCCA CTGCCCGGCC  TTCTCCGACA GGCTGTACAA CTTCAACGCC ACCCACCAGC AGGATCCCTC CTTGGACGCC GGCCTTGCCG ACTACCTCAA GGGGCGGTGC CCGCCTCCGG GAACCGACCG TACCACCGTT  TCCCTGGACC TCGCCACGCC TAATCGTCTG GACGTGCAGT ACTACAGAAA CCTGCAGAAG GGGAGGGGGC TGTTAACCTC CGACCAGACG CTGTGGACCA GCTCTCTCAC GGCGGACAAG 
GTGGCGTCGT TCGCCGAGAA GCCCAACGCC TGGGCGAAAA GTACGCGGCC GCCATGGTGC GGATGGGTGC TATCGACGTA CTGA 

Retrieve as FASTA