Entry information : GbPrx07(Ginbil_Gb_03365)
Entry ID 1323
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2015-02-15 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx07(Ginbil_Gb_03365)
Name GbPrx07(Ginbil_Gb_03365)
Class Class III peroxidase    [Orthogroup: Prx095]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx07
start..stop
S start..stop
CmichPrx01 513 0 1..334 25..361
PabPrx158 492 9e-177 8..334 9..338
PsiPrx06 483 3e-173 6..334 10..341
PabPrx17 479 1e-171 6..334 10..341
Literature and cross-references GbPrx07(Ginbil_Gb_03365)
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Ginkgo megasporophyll
EST ref. GenBank:   DR074673.1 [3' end]
Protein sequence: GbPrx07(Ginbil_Gb_03365)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (305)
PWM (Da):   %s   36737.07 (33505.4)  
PI (pH):   %s   10.21 (10.14) Peptide Signal:   %s   cut: 30 range:30-334
Sequence
Send to BLAST
Send to Peroxiscan
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MGQLLIPLRM LQVLLVGLTF MSCMQTSRAH YALTPHFYDK TCPKAQAIIK SVVKRAVKKE IRMAASLLRL HFHDCFVKGC DASLLLDDTS NFTGEKTANP NLNSARGFGV VDKIKKAVEK  ECPGIVSCAD ILTVAARDSV VIRGGPYWTV PLGRRDSRSA SKSGANYNIP SPSSTHQTLE TKFKLKGLNV VDLVALSGAH TIGLARCTNF KQRLYNQTGN GKPDPTIEKK FLHQLRSKCP 
RSGGDNKTTP LDLVSPTTFD THYYLNLESG RGLLNSDQIL YSTKGSETKA LVKYYATHTE AFFHQFAISM INMGNITPLT GSRGEIRKNC RKMN 

Retrieve as FASTA  
Remarks Complete sequence from genomic, RNA seq (gba_locus_20325_iso_2_len_1564_ver_2) and 2 ESTs (ik98f12.g1 from the Vicogenta database).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCCAAC TTTTAATTCC GTTGAGAATG TTGCAGGTTT TGCTAGTGGG ATTGACATTC ATGTCATGCA TGCAGACATC AAGGGCACAT TATGCTCTCA CTCCACATTT TTATGACAAA  ACTTGTCCCA AAGCACAGGC CATCATCAAG TCAGTGGTTA AACGGGCTGT GAAGAAGGAG ATCAGAATGG CAGCTTCTTT ACTTCGCCTG CATTTTCATG ACTGTTTTGT GAAGGGTTGT  GATGCTTCAT TGTTGCTTGA TGACACCTCC AACTTCACAG GGGAGAAGAC AGCAAACCCA AACCTGAACT CTGCAAGAGG TTTTGGAGTA GTGGATAAGA TAAAGAAAGC AGTGGAGAAA  GAATGCCCTG GCATTGTGTC TTGTGCTGAT ATTCTTACTG TGGCAGCTCG TGATTCAGTT GTCATTAGAG GAGGACCCTA CTGGACTGTG CCTTTGGGCA GGAGAGATTC TAGAAGTGCA  AGCAAAAGCG GTGCAAATTA CAACATTCCA TCACCCAGCT CAACCCATCA GACATTGGAG ACAAAATTTA AACTTAAAGG CCTCAATGTG GTGGACTTAG TTGCATTATC AGGAGCGCAC  ACAATAGGTC TGGCACGATG TACAAACTTC AAACAAAGGC TCTACAATCA GACTGGAAAT GGCAAACCTG ATCCCACCAT TGAGAAGAAA TTTCTTCACC AATTGAGATC AAAATGCCCT  CGGTCAGGAG GGGACAATAA GACTACACCA TTAGATCTGG TTAGCCCCAC TACATTTGAC ACTCACTACT ACCTAAATTT GGAGTCAGGG AGGGGACTAC TCAATTCCGA TCAGATTCTC  TACTCTACAA AAGGAAGCGA AACGAAGGCC TTGGTCAAAT ATTATGCAAC ACATACTGAA GCATTTTTTC ATCAATTTGC CATATCAATG ATCAATATGG GCAACATTAC TCCTCTAACG 
GGCTCTCGTG GAGAGATTAG GAAAAACTGC CGTAAAATGA ATTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGTTTACA AGTGTGAAGT TTTCATTATA TAAGTCTCAT TTTCATGCAT CCAGAATGCC ATGCCCTGTT TCCTTTGACA TATCCAAGGA AGAAGAAGTG TTAGAGGTTT AGTTTTTGGA  TAAGGAAAAT ATGGGCCAAC TTTTAATTCC GTTGAGAATG TTGCAGGTTT TGCTAGTGGG ATTGACATTC ATGTCATGCA TGCAGACATC AAGGGCACAT TATGCTCTCA CTCCACATTT  TTATGACAAA ACTTGTCCCA AAGCACAGGC CATCATCAAG TCAGTGGTTA AACGGGCTGT GAAGAAGGAG ATCAGAATGG CAGCTTCTTT ACTTCGCCTG CATTTTCATG ACTGTTTTGT  GAAGGGTTGT GATGCTTCAT TGTTGCTTGA TGACACCTCC AACTTCACAG GGGAGAAGAC AGCAAACCCA AACCTGAACT CTGCAAGAGG TTTTGGAGTA GTGGATAAGA TAAAGAAAGC  AGTGGAGAAA GAATGCCCTG GCATTGTGTC TTGTGCTGAT ATTCTTACTG TGGCAGCTCG TGATTCAGTT GTCATTAGAG GAGGACCCTA CTGGACTGTG CCTTTGGGCA GGAGAGATTC  TAGAAGTGCA AGCAAAAGCG GTGCAAATTA CAACATTCCA TCACCCAGCT CAACCCATCA GACATTGGAG ACAAAATTTA AACTTAAAGG CCTCAATGTG GTGGACTTAG TTGCATTATC  AGGAGCGCAC ACAATAGGTC TGGCACGATG TACAAACTTC AAACAAAGGC TCTACAATCA GACTGGAAAT GGCAAACCTG ATCCCACCAT TGAGAAGAAA TTTCTTCACC AATTGAGATC  AAAATGCCCT CGGTCAGGAG GGGACAATAA GACTACACCA TTAGATCTGG TTAGCCCCAC TACATTTGAC ACTCACTACT ACCTAAATTT GGAGTCAGGG AGGGGACTAC TCAATTCCGA  TCAGATTCTC TACTCTACAA AAGGAAGCGA AACGAAGGCC TTGGTCAAAT ATTATGCAAC ACATACTGAA GCATTTTTTC ATCAATTTGC CATATCAATG ATCAATATGG GCAACATTAC  TCCTCTAACG GGCTCTCGTG GAGAGATTAG GAAAAACTGC CGTAAAATGA ATTAATTAAT CATCAACTAA ACTTTATCAT CCTTAGGATG CCTATCCTAG TTTCGAGTGT GCTTTACCTT  TATCTCTTTT GAGGATACGA CCCACACGTC ATGAGATGTA CCCCTTGTTT TAGGGTGAAG TGGTCGTTTA TTTCAATGCA ATAATTTGAG GTGACATGTT CCTGTAATGT ATTCTTTGAC  ATGAATGTCA CCCTCATTAA AGCCATGTCT GTGGGCTTTG TAAATCAAAA GTGCATTTAT GGGTGTCAAG CATCATCACC ACCTATGGAT TCTTGTTATC TAGAAAGTTT AAAGTTTTAT  ACTTGTCTCT ATGTGAGAAG GTATACAAGT TTAGGCTTAA CACCTCCTTT GATGTATGAC ATCGGATTTG TTATTCTCTT ATTCAACATT TGGAATAAAA ATTCTTTTTG TGTGGAAAAA 
AAAA 

Retrieve as FASTA