Entry information : SpolPrx30 (Spipo5G0070400)
Entry ID 13232
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-17 (Christophe Dunand)
Peroxidase information: SpolPrx30 (Spipo5G0070400)
Name (synonym) SpolPrx30 (Spipo5G0070400)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx30
start..stop
S start..stop
SpolPrx12 343 7e-123 3..192 1..190
SpolPrx[P]43 293 3e-103 19..192 1..174
SpolPrx18 290 4e-100 3..188 136..312
SpolPrx05 272 9e-93 3..191 135..325
Literature and cross-references SpolPrx30 (Spipo5G0070400)
Protein sequence: SpolPrx30 (Spipo5G0070400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   192
PWM (Da):   %s   20840.56  
PI (pH):   %s   10.02
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQSKGIFYEV PSGRRDGKVS LSSETFANLP SPSFNLDQLT KNFARKGLTQ EDLVTLSGAH SIGKADCSSF SNRLYNFSST LRTDPSLDPA YAAQLKKKCP PGTTGSSVPM DPPSPEVLDS 
SYYKGVIENR GLFTSDQALM SCPVTARQVR ANRNNNFLFN KKFAAAMVKM GKIGVLTGTA GEIRLNCRVV NK* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exons 1 and 2 are missing due to N in the sequence.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGAGCA AGGGTATCTT CTATGAAGTG CCCTCCGGAA GAAGGGATGG AAAAGTCTCT TTGAGCTCGG AGACGTTCGC GAACTTGCCT TCACCCTCCT TTAATCTCGA TCAGCTTACT  AAGAATTTCG CTAGAAAGGG CCTGACACAG GAGGACTTGG TCACCCTCTC TGGTGCGTAC ATATGTGATG CCATCGATCG TCTAGGCTGC TTCCATTCAC CTTATAACCA AACAATATAT  CAACTACCTA CCTATCGTCA CTAAGAGATG ATATCCCGTG GTGTTGTAAC CAGGTGCACA TTCCATTGGG AAAGCTGACT GTTCCTCGTT CAGCAACAGG CTCTACAACT TTAGCTCCAC  CTTGCGGACG GACCCGAGCC TGGACCCAGC CTACGCAGCC CAGCTGAAGA AAAAGTGTCC CCCGGGCACC ACAGGTTCGA GCGTGCCCAT GGACCCTCCC TCTCCCGAGG TCCTCGATTC  CAGCTACTAC AAAGGCGTTA TCGAGAACCG TGGCCTGTTC ACCTCTGATC AGGCGCTCAT GTCCTGTCCG GTAACGGCGA GGCAAGTGAG GGCCAACCGG AACAACAATT TTCTTTTCAA 
CAAGAAATTC GCGGCGGCAA TGGTGAAGAT GGGTAAGATT GGCGTCCTCA CTGGGACCGC AGGCGAGATC CGTTTGAACT GCAGGGTCGT CAACAAATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGAGCA AGGGTATCTT CTATGAAGTG CCCTCCGGAA GAAGGGATGG AAAAGTCTCT TTGAGCTCGG AGACGTTCGC GAACTTGCCT TCACCCTCCT TTAATCTCGA TCAGCTTACT  AAGAATTTCG CTAGAAAGGG CCTGACACAG GAGGACTTGG TCACCCTCTC TGGTGCACAT TCCATTGGGA AAGCTGACTG TTCCTCGTTC AGCAACAGGC TCTACAACTT TAGCTCCACC  TTGCGGACGG ACCCGAGCCT GGACCCAGCC TACGCAGCCC AGCTGAAGAA AAAGTGTCCC CCGGGCACCA CAGGTTCGAG CGTGCCCATG GACCCTCCCT CTCCCGAGGT CCTCGATTCC  AGCTACTACA AAGGCGTTAT CGAGAACCGT GGCCTGTTCA CCTCTGATCA GGCGCTCATG TCCTGTCCGG TAACGGCGAG GCAAGTGAGG GCCAACCGGA ACAACAATTT TCTTTTCAAC 
AAGAAATTCG CGGCGGCAAT GGTGAAGATG GGTAAGATTG GCGTCCTCAC TGGGACCGCA GGCGAGATCC GTTTGAACTG CAGGGTCGTC AACAAATGA 

Retrieve as FASTA