Entry information : SpolPrx31 ( Spipo2G0096700)
Entry ID 13233
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-03-18 (Catherine Mathe)
Peroxidase information: SpolPrx31 ( Spipo2G0096700)
Name (synonym) SpolPrx31 ( Spipo2G0096700)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx31
start..stop
S start..stop
RcPrx21 537 0 24..329 28..333
VvPrx04 533 0 14..329 5..320
LuPrx69 524 0 6..330 19..341
CpapPrx52 521 0 11..326 7..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6898503..6898721 219 N° 2 6898796..6898996 201 N° 3 6899098..6899263 166 N° 4 6899979..6900385 407
join(6898503..6898721,6898796..6898996,6899098..6899263,6899979..6900385)


exon

Literature and cross-references SpolPrx31 ( Spipo2G0096700)
DNA ref. Phytozome 12:   pseudo2 (6898503..6900385)
Cluster/Prediction ref. Phytozome Gene 12:   31510347
Protein sequence: SpolPrx31 ( Spipo2G0096700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (304)
PWM (Da):   %s   35350.95 (32919.6) Transmb domain:   %s   i5-27o
PI (pH):   %s   9.15 (9.12) Peptide Signal:   %s   cut: 27 range:27-330
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKPGVVAAALLAALSVCLLSVPAAAQLRRDYYASTCPNVENIVRGVVQTKFRQTFVTVPATLRLFFHDCFVEGCDASVMVASSGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVVALSGGPSYAVELGRLDGLRSTASSVNGKLPQPTFNLNQLTSMFAANGLSQTDMIALSAAHTLGFSHCSKFSKRIYSFSSRNPVDPTLNRTYAAQLQAMCPRNVDPRIAIDMDPVTPRTFDNVYFKNLQQGLGLFSSDQVLHTDTRSRPTVNAWAQNSAAFERAFVTAMTKLGRVGVKTGSRGNIRTRCDILG*

Retrieve as FASTA  
Remarks
Promoter
Send to BLAST
Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGTGTTCCCG TCGGAACCTC GCTTGCGCGT ACCGAAGTGG ACTGAATAAT TGAGTCATTT ATTACGGAGA AACGAAGCAC GTTAATACAA ATATCGCGCG GAACCAGCTG GGTTGTTCTG  ATTTTTTGCG ACCAGCGTGG GAATCAGTAT ACGCTACGAA CGAGGAAGGT GGATTCTCAT GTTCCAGGAG AAGAAAATAG TCAAAACGAT GTGGGTGATC AGCTCCTCGT ATCAAGTGAT  CGTGAACTCG TGCCAAGCTA AATAATTCCA TGAATATCTG GTTTTTATAT TCGTTTTTTT CCCGATAAAT GCTAATCGTG AGCAAAATTT CATCCGTTTG GGTGTGTTTT CGCGAGTACA  ATTTGAGCTC TCTTTAACTT AGCTTTGTTT ATATCTTGTA GGTTTTTCAA ACCGTTCTAA ACATATCACA TTGCGATAAA ATCTTTGACC CGATAATGAC ATCTGTCTTA TTACATCTAA  TCCACGTTCT CTCTCCCCCT CCCCTCTCTC TATCTATATT TATATATACG TATGCATGTA TGTACATTAA GTCCGAAGGA AATGTGATTT GAAATCAACG TAGTCGAAGA AGAACGTGTA  AACCCACCGG GGTCTTAGAG CGTCGCTCAA GAGTGGATAT CGCCGGAACA AGCCGGACTC GAGAGGAACG CATGCATAGA TATTTATATC AACACACGTA TACACGCGCC CACACTATCA  CAATGTGTAT AAGTATAGAC TCTAGTGATC GGAGCCGCAC TACTAAAGTC GTCTGGTCCC TGGAATATAT GTCTTTGATC CAATCTATTA CGATATTCCC AGCGCGTCTG CTTTGTCACA  TTCGTCTCAT GAACAGGAAG GACTCCACGG TGGAGAAGAT TCGTCTCATG AAAGCTAACA TCCATGGAGG CAAAGATTCG CGCTTGCTGC TAGAGCGACA GCCAAACGAG AAAAGAGGGG  CCGATGATGG TGCTTCACTT GAAGGAAGAC AGTGTCCCTT CGCCCTCCCT TCTTCTTCAG GCTTCCTGGA TCTTCCGCTT TTATTCCTCT CAACGTTGTT TCATTTAGAT GGGCATATTC  CTCTTCCTGC ACGCTGCAAA CCCCGTCATC AAATCCATGC TAACTTGATC CTCTCTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTTT CTGTGGGGGG  AGATCCAAAG AGAGGCTAGC GCAGTCCAAG CTTATCGAAA GAAGTGGTAA GGTGATACAA GGCCAGATGA TGGGTGTTTA AATGCCCGGC AATTACGCAA CCTTGGCCTA ATATTAAAGA  GCTGTGGTAC TTCGAGAGAA ACTTGCAGGG TCCCCAGGTA GCCTCCTAAA CTCATTTAAA GCATCGATCC GACGGTGATA GTGAGAGCTC TCTAGTGGAA TGACTGAAAC AGGATTTTCA  CGCGTGTGGG TCTGGCTTCT GCTGAAAGAG GGGAGAGTTT TGTTCAACCC ATCTCGGTGT TTGATAAAAT GCTTGCTTCG CGGACAAATC CGCCTACTTC CCAGCTATGA TTTTCAGTAT  AGCAAATAGA AGTCGTCGTC GAGCTGCCAG CTGCCTCTTG TTGACTCGTT ATCGTCCTAG TGCGGACGAA TAGGCGGCCG GCGGGGAGAA GGATTCGGTC ACCGTCATGC GGAGTGAATG  GATATCGGGC TCGTCAAAGC TTCGTGCAAT GGAAGCCAGT CTGATCGGGG AAGGGGAGTA GTTGAGTCCC TTGCCTCTCC ACGCCTTCTC TCCTCTAACT AGTCTCCATC GAGGTCCGTG  GCTTCTTGAA ATTTTTAAGA GACAACTGGC TGGATAGCCC CACATCCAAC GCACCTAGTG GGGTCGCCCC ACCACCTATA TATTCAGCCC CGCCTTCCCT CTCTTCCGCT CCCCATCTGT  ACCCATCAAA ATCAAGTAGT CCACCTCCTC TCTCTGCCTC CCCCTTTCCC CCCTCCCCCG GTTCTTTCTA CTGATAGCAA ATGGGTAAAC CCGGGGTGGT GGCCGCGGCG CTTCTGGCCG  CGCTGAGCGT TTGCCTCCTT TCAGTACCGG CCGCGGCGCA GCTCCGGCGG GACTACTACG CCAGCACATG CCCCAACGTG GAGAACATCG TGAGGGGCGT GGTGCAGACC AAGTTTCGGC  AAACCTTTGT CACCGTCCCT GCGACCCTCA GGCTCTTCTT CCACGACTGC TTCGTCGAGG TCGGAAACAA CTACACGGCC GCATTCGCAT CCAGCCTGAG CCATTATGTC GGTGCTAACC  GCGTGGATTT CAGGGCTGTG ATGCGTCCGT CATGGTGGCG TCCTCGGGGT CCAACACCGC CGAGAAGGAC CACCCGGACA ACCTATCTCT GGCTGGAGAC GGGTTCGACA CTGTAATCAA  GGCAAAGGCC GCCGTCGACG CCGTGCCGCA GTGCCGGAAC AAGGTCTCCT GCGCCGACAT CCTCGCCCTC GCAACGCGTG ACGTCGTTGC TCTGGTCTGT TTCCCCCCAT TTGCTTTCAT  CCTCTTCCTT TCCCTGCTGC CGCTGAAAGG AGTTCTGATG GGTTGTCTCA ACTTCATTTT CGCAATGGGG AGCAGTCCGG CGGCCCTTCG TATGCAGTGG AGCTGGGCAG ACTAGACGGC  CTCCGCTCGA CGGCGTCTAG CGTAAACGGG AAGCTCCCCC AGCCTACCTT CAACCTCAAT CAGCTCACCT CCATGTTCGC CGCCAACGGC CTCTCTCAGA CTGACATGAT CGCGCTCTCA  GGTACTAGTC CAGTTCTTCT CTCATAGAGC CCGAGCCCCT CCCCCTTCTA CCGGCGGCGT GCTTCCTCGC CGTCCTCGGG AGAAGGATCA GCTGCTCAGC TGAGATGTCA TTTTCATGAG  GCCCGGATTT TTAGGTCTAT CTCCATGAAA AATGACGACT TTTACAGCCT CTCCGCCCCT CAGAAGCCAT TGATCCATTC AATCAGGGCT TCTCTCCTGG TTTACGCGTA AAACCCTGCT  ACGACCTTTG AATAACTTAT TATTTAATTA TTTTTCGTGA GTCCTACCCC TCCTTGTTTC CCACTCCCCC ATTTAGTTCT TTAAAGCGAC ATATTTCGTC CTCATCCACT AATTTCACAC  GACAAGCTCG TGAATTAGAC AAAGAAACGA TCTTGAGGCT CTTCTTGCAT TTCGAGCCTC TTCCTTGATT GAGATGTTGA TAAGGCCCGT CTATTATGTG ATTCTCTTTA ATTTATTGTA  CGCGGAAAAG GGCACAGAGG TCAATCCAGA CTTTTTAAAA AGGGTTTAAT CAATTATGGT TTTCCTACAT GTTCTTGATC TTGTGGGGCC GTCCTCAGGA TCCTCAGAAG GAATGAACCT  TTTTTTACCC AAGTTTTGTT TTTTTTTTTA ATTCAGTCGC GGTGGAGACC ATGGTTACCG CCCGTCTTGG TTTCCGTTGC CCTGTCTGAG CCGTGCATCT GGTTGGAAAC CTGCAGCGGC  GCACACTCTG GGATTCTCAC ACTGCAGCAA GTTCTCAAAG CGCATCTACA GCTTCAGCTC AAGGAACCCG GTGGACCCGA CGCTGAACAG GACCTACGCG GCGCAGCTGC AGGCCATGTG  CCCGCGCAAC GTCGACCCCA GGATCGCCAT CGACATGGAC CCCGTCACCC CGAGGACCTT CGACAATGTC TACTTCAAGA ACCTCCAGCA AGGGTTGGGC CTCTTCTCCT CCGATCAGGT  CCTCCATACC GACACCCGTT CCCGCCCCAC TGTCAACGCC TGGGCCCAGA ACTCTGCAGC CTTCGAACGG GCCTTCGTCA CCGCCATGAC CAAGCTCGGC CGCGTCGGCG TCAAGACTGG 
GTCGCGGGGG AACATCAGAA CCCGGTGCGA TATCCTCGGC TAG 

Retrieve as FASTA  
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAAACCCGGGGTGGTGGCCGCGGCGCTTCTGGCCGCGCTGAGCGTTTGCCTCCTTTCAGTACCGGCCGCGGCGCAGCTCCGGCGGGACTACTACGCCAGCACATGCCCCAACGTG
GAGAACATCGTGAGGGGCGTGGTGCAGACCAAGTTTCGGCAAACCTTTGTCACCGTCCCTGCGACCCTCAGGCTCTTCTTCCACGACTGCTTCGTCGAG
GTCGGAAACAACTACACGGCC
GCATTCGCATCCAGCCTGAGCCATTATGTCGGTGCTAACCGCGTGGATTTCAGGGCTGTGATGCGTCCGTCATGGTGGCGTCCTCGGGGTCCAACACCGCCGAGAAGGACCACCCGGACA
ACCTATCTCTGGCTGGAGACGGGTTCGACACTGTAATCAAGGCAAAGGCCGCCGTCGACGCCGTGCCGCAGTGCCGGAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGCAACGCGTG
ACGTCGTTGCTCTG
GTCTGTTTCCCCCCATTTGCTTTCATCCTCTTCCTTTCCCTGCTGCCGCTGAAAGGAGTTCTGATGGGTTGTCTCAACTTCATTTTCGCAATGGGGAGCAGTCCGG
CGGCCCTTCGTATGCAGTGGAGCTGGGCAGACTAGACGGCCTCCGCTCGACGGCGTCTAGCGTAAACGGGAAGCTCCCCCAGCCTACCTTCAACCTCAATCAGCTCACCTCCATGTTCGC
CGCCAACGGCCTCTCTCAGACTGACATGATCGCGCTCTCAG
GTACTAGTCCAGTTCTTCTCTCATAGAGCCCGAGCCCCTCCCCCTTCTACCGGCGGCGTGCTTCCTCGCCGTCCTCGGG
AGAAGGATCAGCTGCTCAGCTGAGATGTCATTTTCATGAGGCCCGGATTTTTAGGTCTATCTCCATGAAAAATGACGACTTTTACAGCCTCTCCGCCCCTCAGAAGCCATTGATCCATTC
AATCAGGGCTTCTCTCCTGGTTTACGCGTAAAACCCTGCTACGACCTTTGAATAACTTATTATTTAATTATTTTTCGTGAGTCCTACCCCTCCTTGTTTCCCACTCCCCCATTTAGTTCT
TTAAAGCGACATATTTCGTCCTCATCCACTAATTTCACACGACAAGCTCGTGAATTAGACAAAGAAACGATCTTGAGGCTCTTCTTGCATTTCGAGCCTCTTCCTTGATTGAGATGTTGA
TAAGGCCCGTCTATTATGTGATTCTCTTTAATTTATTGTACGCGGAAAAGGGCACAGAGGTCAATCCAGACTTTTTAAAAAGGGTTTAATCAATTATGGTTTTCCTACATGTTCTTGATC
TTGTGGGGCCGTCCTCAGGATCCTCAGAAGGAATGAACCTTTTTTTACCCAAGTTTTGTTTTTTTTTTTAATTCAGTCGCGGTGGAGACCATGGTTACCGCCCGTCTTGGTTTCCGTTGC
CCTGTCTGAGCCGTGCATCTGGTTGGAAACCTGCAGCGGCGCACACTCTGGGATTCTCACACTGCAGCAAGTTCTCAAAGCGCATCTACAGCTTCAGCTCAAGGAACCCGGTGGACCCGA
CGCTGAACAGGACCTACGCGGCGCAGCTGCAGGCCATGTGCCCGCGCAACGTCGACCCCAGGATCGCCATCGACATGGACCCCGTCACCCCGAGGACCTTCGACAATGTCTACTTCAAGA
ACCTCCAGCAAGGGTTGGGCCTCTTCTCCTCCGATCAGGTCCTCCATACCGACACCCGTTCCCGCCCCACTGTCAACGCCTGGGCCCAGAACTCTGCAGCCTTCGAACGGGCCTTCGTCA
CCGCCATGACCAAGCTCGGCCGCGTCGGCGTCAAGACTGGGTCGCGGGGGAACATCAGAACCCGGTGCGATATCCTCGGCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTAAACCCGGGGTGGTGGCCGCGGCGCTTCTGGCCGCGCTGAGCGTTTGCCTCCTTTCAGTACCGGCCGCGGCGCAGCTCCGGCGGGACTACTACGCCAGCACATGCCCCAACGTG
GAGAACATCGTGAGGGGCGTGGTGCAGACCAAGTTTCGGCAAACCTTTGTCACCGTCCCTGCGACCCTCAGGCTCTTCTTCCACGACTGCTTCGTCGAG
GGCTGTGATGCGTCCGTCATG
GTGGCGTCCTCGGGGTCCAACACCGCCGAGAAGGACCACCCGGACAACCTATCTCTGGCTGGAGACGGGTTCGACACTGTAATCAAGGCAAAGGCCGCCGTCGACGCCGTGCCGCAGTGC
CGGAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGCAACGCGTGACGTCGTTGCTCTG
TCCGGCGGCCCTTCGTATGCAGTGGAGCTGGGCAGACTAGACGGCCTCCGCTCGACGGCG
TCTAGCGTAAACGGGAAGCTCCCCCAGCCTACCTTCAACCTCAATCAGCTCACCTCCATGTTCGCCGCCAACGGCCTCTCTCAGACTGACATGATCGCGCTCTCAG
CGGCGCACACTCTG
GGATTCTCACACTGCAGCAAGTTCTCAAAGCGCATCTACAGCTTCAGCTCAAGGAACCCGGTGGACCCGACGCTGAACAGGACCTACGCGGCGCAGCTGCAGGCCATGTGCCCGCGCAAC
GTCGACCCCAGGATCGCCATCGACATGGACCCCGTCACCCCGAGGACCTTCGACAATGTCTACTTCAAGAACCTCCAGCAAGGGTTGGGCCTCTTCTCCTCCGATCAGGTCCTCCATACC
GACACCCGTTCCCGCCCCACTGTCAACGCCTGGGCCCAGAACTCTGCAGCCTTCGAACGGGCCTTCGTCACCGCCATGACCAAGCTCGGCCGCGTCGGCGTCAAGACTGGGTCGCGGGGG
AACATCAGAACCCGGTGCGATATCCTCGGCTAG

Retrieve as FASTA