Entry information : SpolPrx35 ( Spipo23G0034100)
Entry ID 13238
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-24 (Catherine Mathe)
Peroxidase information: SpolPrx35 ( Spipo23G0034100)
Name (synonym) SpolPrx35 ( Spipo23G0034100)
Class Class III peroxidase    [Orthogroup: Prx031]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx35
start..stop
S start..stop
PtPrx08 476 1e-170 22..323 29..330
VvPrx38 473 9e-170 22..322 27..327
PtrePrx03 471 8e-169 22..323 28..329
MePrx06 471 1e-168 22..323 28..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2073446..2073509 64 N° 2 2073769..2073917 149 N° 3 2074015..2074203 189 N° 4 2074278..2074443 166
N° 5 2074509..2074915 407  
join(2073446..2073509,2073769..2073917,2074015..2074203,2074278..2074443,2074509 ..2074915)


exon

Literature and cross-references SpolPrx35 ( Spipo23G0034100)
DNA ref. Phytozome 12:   pseudo23 (2073446..2074915)
Cluster/Prediction ref. Phytozome Gene 12:   31516799
Protein sequence: SpolPrx35 ( Spipo23G0034100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (300)
PWM (Da):   %s   35440.84 (32852.4)  
PI (pH):   %s   6.51 (6.51) Peptide Signal:   %s   cut: 25 range:25-324
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MERGSGLTSLLLLLLLLSSSYGNAELSRSYYAQSCPRAEEIVKEQVKLLYEKHGNTAVSWLRNLFHDCMVGGCDASILLVAAGGAMSEQTSQRSFGMRNFKYVATIKDALERECPKTVSCADIVALSARDGVALLGGPYVPMKMGRKDSRVSRLEAVEDSIPNHDSDISLVLSRFQSIGIGAEGTVALLGAHSVGRVHCVNLVHRLYPAVDPTLDPDYAAYLKGRCPSPEPDPAAVAYGRNDRETPMTIDNMYYKHLLQHKGLLRVDQQLASDPSTAPFVAKMAADNGYFYERFAEALLLLSETNPLPSDQGEVRKDCRFVNSV*

Retrieve as FASTA  
Remarks
Promoter
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Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AATTGTATGG TGGAACTCTA TTTTTGCCTG ATTTGTGTTC TTCGAGCATT GACGTCACCT CTGATGTCAT CGCCTTATTT CCTTTTTCAC GAATTCTTAA ATATATTATA TTTATAGTTC  AGTTAAAAAA TTACAAAAAA TCGTATTCTT TTAGGAAAAT TCTAAAATAT TACTCGATAT TATATTACAT CCCTATGATT GATATAAAAA TTTTTCACTA TTTTTGGAAT CTTTTATCGA  TTTATAATTA ATTTATTCAT TCTAATATAC TTTTAAAATT TCAAAAATTA GTATTTCTAG TTTTATAAAT TTTAAATTTA TGTGATTTAT TATACAATGA TTAAGTCACG TCAGTGACTC  CGACATAACT CTACATTCTA GATAGGTTGG GATCAGCGAG GGAAAATAGG CAAGGGGAGG CCAAGACATA AAATCTATAA GATCAAACCA ATTATAGGTT TACCTGAACC AATTTGACTT  TTCTCTCTCA CTCTCCCTCT CACTCCCTCT CCCTCTCCCC CTGGCAACAT TGACATGGAC AGAACCCCAG TGGCTACTAG TTAGTCTTCC ATGGCCAACC CGCCTGCCAA ACCCAAATTT  ATGATGCGAC CTGAACTCCA CACACCAGGC TAGGTGGAAG CTCCTTACAT GGCATCACCT ATCTCACCTA CAAATATTCC ACTCCCAATA TTGCAAAGCA CTCCTCAAAT CTCCGAAAAA  CCTCATGCGA ATAATGTTAA CATTTAACAG GCTTCATAAC ACCGCATCCA GTTTGACCCA AGTTTCTTGG ATGTTACTGA AAAGGGAAAC CTGCTCCGAA ACTACACAGT GATATCGGCT  AAATGAACCC CGCCAGGAGA GGATCTCTTT CTCTCTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCCACCC ATCATTCTTC CTCGACCCTT GTCATGGTTG  GAAGTTCATT TCTCTCATAG CCCAGCCGGG TGGGACTCGC AAGCACCAGA TTGCCCAAGG ATGCTCCCTG CCCGTGGAAG CGATAGCTCC GGGCGATATT CCACGGGCAG TGCCGGCGGC  CGCGGCGAAG GGCGGTGCAC GCCGGCGGCT ACCCGTAGGT GCCGTCAACT AAGGAGGCCG AATCATAGCA CCGATGGTGG GGGGGAAGTG GCCTTCCCCC ACGCGCAGCG ACCGTCGCTA  CAGGTGGAAA CGGGCAAGCT TTTCAACCCT CCACCACCGG TGGTTGTCCG TCGGCGGCGC ATGACTCGGA CAAGCATGAA TCGAAAACGA ACAACGCACC CGTGACCCTC AGCAAGTTCC  TTGCATCGTC TATCATATTT TTTATTGACG CGGACCCTCT GAGCGAGGGT CCGGAGATCC TCTCACATGG CCGCCATCAA TGATGGTCTT CTACCTAGTT CGGATCGGCC CGTCCTTCTC  TTGCTTCTCC TGACAAGAGC ATCATAAAAA ATCATCACGG AGCAAAGTTT GGATCTTGGC CCCGTCGGAA AAGCTAGATT GGGTTTGACT TTTTTTTCTA GCCAATCTCG TTTGCTACCA  GGTTCACACT TTCTGTGCCA AGCTGCTCAA ATAACCGCAG TCGAGTCGCA GATTTTGTCA CCCAGCGAAC ACCTGAGGAA GATGCATGCG GCCATCACTG CAGTGGGACT TTGACGGCGG  AATAGCCTGG CGGCGCGGAC GTGGTGCCGG ATGAGGCGGC GGCGAATCGT CGGGACCCCC CCATTCCGCA TCCCGACCCC GTATAATAAT AGTAAATGGG AATTTTTAGC TCCTTGTAGT  CATTGCAGCG GTGGTTGATG CGTTGCTTTC AACGCCCCCC TAAATCATGA TTCCTCTCAT CCACTAAAAA ATTTCCGCAA CGTTATCTTC GTCTGAACTC GTAGCTTCGG CCCCTGCTTT  CAGCTCGAGA TGGATCTCTA TAAAGAGTGG ATACCAGATG GCCATGGTCA TCCATCACCC GGATCTCGAG AGGCACAGCC ATGGAGCGGG GTTCTGGTCT GACTTCTCTC CTCCTGCTCC  TCCTGCTGCT CTCCTCCTCC TATGGTAAAG TTCGGCCTCT CTTCTTCTTC CCTCCCTCCA TTGCCACGAC CATGAGGCTC CAGTCCCTGC GGCAAGTAGC AACGAGAAAG GTTCTGTGGA  CTCAGATCGA AGAAAGTAGT TCGAGTTTGG GTAAAACTTA GGGGCTTGAC GATCAATGAC GAGCTTGACT GGATCACCAT CTTGAGAATC GAAGAATGCG GTCGCAGTCT GGTAATCTTT  CTGCTTCGAT GGATCTCTTC TAATGGGACT GATTCATTTG AAGGCAACGC GGAGCTCAGC CGGAGCTACT ACGCCCAGAG CTGCCCCAGG GCGGAGGAGA TCGTCAAGGA ACAGGTGAAG  CTGCTGTACG AGAAGCACGG CAACACCGCC GTCTCGTGGC TCAGGAACCT CTTTCATGAC TGCATGGTCG GGGTAAGCCC GTTGGAGCTC GGCTCCTCGT CTCTTGTGCG TGTGAGAACG  CTGGTTCGCG GTAAGTAGCT AACGGAGCGT GTCTTTGGGA GCGACGCAGG GATGCGATGC GTCGATTCTG CTGGTGGCCG CCGGCGGCGC CATGTCGGAG CAGACTTCGC AGAGGAGCTT  CGGCATGAGG AACTTCAAGT ACGTGGCCAC GATTAAGGAC GCCCTCGAGC GTGAGTGCCC CAAGACGGTC TCCTGCGCCG ACATCGTCGC CCTCTCCGCC CGAGACGGCG TCGCCCTGGT  GAGCCACCGG CGGTCCCTCT GGCGAGCCAG TGCCCGCTTA CCCACTTACG TTTGCTCCAC ACACGCGCGC AGCTGGGAGG GCCGTACGTC CCCATGAAGA TGGGGAGGAA GGACAGCAGG  GTGAGCCGCC TAGAAGCAGT GGAGGACTCC ATCCCCAACC ACGATTCCGA CATCTCCCTG GTGCTCTCCC GCTTCCAGTC CATCGGCATT GGCGCAGAAG GCACCGTAGC GCTGCTGGGT  ACCTGACTAT CTCCTTCCTA CTCGTGCGCG AAGTTGCAGA ACTTGATGCC GCAGTCTCTG CAGGAGCTCA TTCGGTGGGC CGCGTCCACT GCGTCAACCT GGTGCACCGG CTCTACCCCG  CCGTTGACCC CACATTGGAC CCCGACTACG CGGCGTACCT GAAAGGGCGG TGTCCGTCGC CGGAGCCGGA CCCAGCGGCG GTGGCCTACG GCCGGAATGA TCGGGAGACG CCGATGACGA  TCGACAACAT GTACTACAAG CACCTGCTGC AGCATAAGGG GCTCCTGCGG GTGGATCAGC AGCTGGCCTC CGACCCTTCC ACCGCCCCCT TCGTGGCAAA GATGGCCGCG GACAACGGGT 
ACTTCTACGA GCGCTTCGCG GAGGCCCTCC TCCTGCTGTC GGAGACCAAC CCGCTGCCCA GCGACCAGGG GGAGGTCAGG AAGGACTGCC GCTTCGTCAA CTCCGTATAG 

Retrieve as FASTA  
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGGGGTTCTGGTCTGACTTCTCTCCTCCTGCTCCTCCTGCTGCTCTCCTCCTCCTATGGTAAAGTTCGGCCTCTCTTCTTCTTCCCTCCCTCCATTGCCACGACCATGAGGCTC
CAGTCCCTGCGGCAAGTAGCAACGAGAAAGGTTCTGTGGACTCAGATCGAAGAAAGTAGTTCGAGTTTGGGTAAAACTTAGGGGCTTGACGATCAATGACGAGCTTGACTGGATCACCAT
CTTGAGAATCGAAGAATGCGGTCGCAGTCTGGTAATCTTTCTGCTTCGATGGATCTCTTCTAATGGGACTGATTCATTTGAAGGCAACGCGGAGCTCAGCCGGAGCTACTACGCCCAGAG
CTGCCCCAGGGCGGAGGAGATCGTCAAGGAACAGGTGAAGCTGCTGTACGAGAAGCACGGCAACACCGCCGTCTCGTGGCTCAGGAACCTCTTTCATGACTGCATGGTCGGG
GTAAGCCC
GTTGGAGCTCGGCTCCTCGTCTCTTGTGCGTGTGAGAACGCTGGTTCGCGGTAAGTAGCTAACGGAGCGTGTCTTTGGGAGCGACGCAGGGATGCGATGCGTCGATTCTGCTGGTGGCCG
CCGGCGGCGCCATGTCGGAGCAGACTTCGCAGAGGAGCTTCGGCATGAGGAACTTCAAGTACGTGGCCACGATTAAGGACGCCCTCGAGCGTGAGTGCCCCAAGACGGTCTCCTGCGCCG
ACATCGTCGCCCTCTCCGCCCGAGACGGCGTCGCCCTG
GTGAGCCACCGGCGGTCCCTCTGGCGAGCCAGTGCCCGCTTACCCACTTACGTTTGCTCCACACACGCGCGCAGCTGGGAGG
GCCGTACGTCCCCATGAAGATGGGGAGGAAGGACAGCAGGGTGAGCCGCCTAGAAGCAGTGGAGGACTCCATCCCCAACCACGATTCCGACATCTCCCTGGTGCTCTCCCGCTTCCAGTC
CATCGGCATTGGCGCAGAAGGCACCGTAGCGCTGCTGG
GTACCTGACTATCTCCTTCCTACTCGTGCGCGAAGTTGCAGAACTTGATGCCGCAGTCTCTGCAGGAGCTCATTCGGTGGGC
CGCGTCCACTGCGTCAACCTGGTGCACCGGCTCTACCCCGCCGTTGACCCCACATTGGACCCCGACTACGCGGCGTACCTGAAAGGGCGGTGTCCGTCGCCGGAGCCGGACCCAGCGGCG
GTGGCCTACGGCCGGAATGATCGGGAGACGCCGATGACGATCGACAACATGTACTACAAGCACCTGCTGCAGCATAAGGGGCTCCTGCGGGTGGATCAGCAGCTGGCCTCCGACCCTTCC
ACCGCCCCCTTCGTGGCAAAGATGGCCGCGGACAACGGGTACTTCTACGAGCGCTTCGCGGAGGCCCTCCTCCTGCTGTCGGAGACCAACCCGCTGCCCAGCGACCAGGGGGAGGTCAGG
AAGGACTGCCGCTTCGTCAACTCCGTATAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGGGGTTCTGGTCTGACTTCTCTCCTCCTGCTCCTCCTGCTGCTCTCCTCCTCCTATGGCAACGCGGAGCTCAGCCGGAGCTACTACGCCCAGAGCTGCCCCAGGGCGGAGGAG
ATCGTCAAGGAACAGGTGAAGCTGCTGTACGAGAAGCACGGCAACACCGCCGTCTCGTGGCTCAGGAACCTCTTTCATGACTGCATGGTCGGG
GGATGCGATGCGTCGATTCTGCTGGTG
GCCGCCGGCGGCGCCATGTCGGAGCAGACTTCGCAGAGGAGCTTCGGCATGAGGAACTTCAAGTACGTGGCCACGATTAAGGACGCCCTCGAGCGTGAGTGCCCCAAGACGGTCTCCTGC
GCCGACATCGTCGCCCTCTCCGCCCGAGACGGCGTCGCCCTG
CTGGGAGGGCCGTACGTCCCCATGAAGATGGGGAGGAAGGACAGCAGGGTGAGCCGCCTAGAAGCAGTGGAGGACTCC
ATCCCCAACCACGATTCCGACATCTCCCTGGTGCTCTCCCGCTTCCAGTCCATCGGCATTGGCGCAGAAGGCACCGTAGCGCTGCTGG
GAGCTCATTCGGTGGGCCGCGTCCACTGCGTC
AACCTGGTGCACCGGCTCTACCCCGCCGTTGACCCCACATTGGACCCCGACTACGCGGCGTACCTGAAAGGGCGGTGTCCGTCGCCGGAGCCGGACCCAGCGGCGGTGGCCTACGGCCGG
AATGATCGGGAGACGCCGATGACGATCGACAACATGTACTACAAGCACCTGCTGCAGCATAAGGGGCTCCTGCGGGTGGATCAGCAGCTGGCCTCCGACCCTTCCACCGCCCCCTTCGTG
GCAAAGATGGCCGCGGACAACGGGTACTTCTACGAGCGCTTCGCGGAGGCCCTCCTCCTGCTGTCGGAGACCAACCCGCTGCCCAGCGACCAGGGGGAGGTCAGGAAGGACTGCCGCTTC
GTCAACTCCGTATAG

Retrieve as FASTA