Entry information : SpolPrx39 (Spipo3G0072400)
Entry ID 13242
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-17 (Christophe Dunand)
Peroxidase information: SpolPrx39 (Spipo3G0072400)
Name (synonym) SpolPrx39 (Spipo3G0072400)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx39
start..stop
S start..stop
SpolPrx09 491 6e-179 5..262 1..258
BdiPrx67 288 3e-97 4..254 75..332
ZmPrx143 283 2e-95 4..255 77..336
SiPrx03 278 3e-93 4..255 73..332
Literature and cross-references SpolPrx39 (Spipo3G0072400)
Protein sequence: SpolPrx39 (Spipo3G0072400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   262
PWM (Da):   %s   27948.35  
PI (pH):   %s   7.75
Sequence
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Send to Peroxiscan
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SHSQGCDASV LLNSTPGNPS EKEAIPNLSL RGFEVIDAAK RTIEAKCPGV VSCADILTFA ARDSAALAGN ISYQVPAGRR DGVVSNISEV NLPPPFANAS DLIRRFAEKN LTADELVTLS  GAHSIGVAHC GTFLGRIFQN GSSQIDPTLS LSYAELLQTR CTPTPLSTTT VRQDLITADV LDNKYYVGLQ NNLGLFTSDH ALTTVAALKA AVDVNARYPA VWAEKFKCAS VKMGNIEVLT 
GKKGEIRKQC SVINSRPRFA EE* 

Retrieve as FASTA  
Remarks Partial sequence from genomic (intron 1?). First exon is missing due to N in the sequence.
DNA
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TCTCATTCCC AGGGCTGCGA CGCCTCGGTG CTCCTCAACT CCACCCCGGG GAACCCTTCC GAGAAGGAGG CGATCCCCAA TCTGAGCCTC CGCGGCTTCG AGGTGATCGA CGCCGCCAAG  AGGACCATCG AGGCCAAGTG CCCCGGCGTG GTCTCCTGCG CCGATATCCT CACATTCGCC GCCCGCGACA GCGCAGCCCT CGCCGGCAAC ATCTCTTACC AAGTCCCCGC AGGTCGTCGG  GACGGCGTCG TCTCCAACAT CTCGGAGGTC AACCTGCCCC CGCCATTCGC TAACGCCAGT GATCTCATCC GACGCTTCGC CGAGAAGAAC CTGACGGCGG ACGAGCTGGT CACCCTCTCC  GGCGCCCACT CCATCGGCGT TGCCCACTGC GGGACCTTCC TCGGCCGGAT CTTCCAGAAC GGCAGTAGCC AGATCGACCC AACTCTGAGC CTCTCCTACG CCGAGCTGTT GCAAACCAGG  TGCACGCCCA CGCCCTTGAG TACGACGACG GTGAGACAGG ATCTGATCAC CGCCGACGTT CTGGACAACA AGTACTACGT GGGGCTTCAG AACAATCTGG GGTTGTTCAC CTCCGACCAC  GCCCTGACGA CGGTGGCTGC CCTCAAGGCA GCGGTGGACG TCAACGCGAG GTACCCCGCT GTGTGGGCAG AGAAGTTCAA GTGCGCCTCG GTGAAGATGG GAAATATCGA GGTGCTTACG 
GGTAAGAAGG GCGAGATCAG GAAGCAGTGC AGTGTCATTA ACAGCCGCCC CCGCTTTGCG GAGGAATAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCTCATTCCC AGGGCTGCGA CGCCTCGGTG CTCCTCAACT CCACCCCGGG GAACCCTTCC GAGAAGGAGG CGATCCCCAA TCTGAGCCTC CGCGGCTTCG AGGTGATCGA CGCCGCCAAG  AGGACCATCG AGGCCAAGTG CCCCGGCGTG GTCTCCTGCG CCGATATCCT CACATTCGCC GCCCGCGACA GCGCAGCCCT CGCCGGCAAC ATCTCTTACC AAGTCCCCGC AGGTCGTCGG  GACGGCGTCG TCTCCAACAT CTCGGAGGTC AACCTGCCCC CGCCATTCGC TAACGCCAGT GATCTCATCC GACGCTTCGC CGAGAAGAAC CTGACGGCGG ACGAGCTGGT CACCCTCTCC  GGCGCCCACT CCATCGGCGT TGCCCACTGC GGGACCTTCC TCGGCCGGAT CTTCCAGAAC GGCAGTAGCC AGATCGACCC AACTCTGAGC CTCTCCTACG CCGAGCTGTT GCAAACCAGG  TGCACGCCCA CGCCCTTGAG TACGACGACG GTGAGACAGG ATCTGATCAC CGCCGACGTT CTGGACAACA AGTACTACGT GGGGCTTCAG AACAATCTGG GGTTGTTCAC CTCCGACCAC  GCCCTGACGA CGGTGGCTGC CCTCAAGGCA GCGGTGGACG TCAACGCGAG GTACCCCGCT GTGTGGGCAG AGAAGTTCAA GTGCGCCTCG GTGAAGATGG GAAATATCGA GGTGCTTACG 
GGTAAGAAGG GCGAGATCAG GAAGCAGTGC AGTGTCATTA ACAGCCGCCC CCGCTTTGCG GAGGAATAA 

Retrieve as FASTA