Entry information : Spol1CysPrx01 (Spipo27G0014500)
Entry ID 13250
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-19 (Christophe Dunand)
Peroxidase information: Spol1CysPrx01 (Spipo27G0014500)
Name (synonym) Spol1CysPrx01 (Spipo27G0014500)
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Spol1CysPrx01
start..stop
S start..stop
Cs1CysPrx 302 4e-106 5..184 40..219
Vv1CysPrx 301 1e-105 5..184 40..219
Mt1CysPrx01 298 2e-104 5..184 40..218
Fe1CysPrx 296 4e-104 5..184 40..219
Literature and cross-references Spol1CysPrx01 (Spipo27G0014500)
Protein sequence: Spol1CysPrx01 (Spipo27G0014500)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184
PWM (Da):   %s   20162.24  
PI (pH):   %s   6.12
Sequence
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Send to Peroxiscan
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SLATGDFTPV CTTELGKMAS YAEEFERRGV KLLGLSCDDL HSHQEWIKDI EAYTPGCKVG YPIVADPKRE LLKELNMMDP DEKDSAGAQL PSRALHIVGP DKKVKLSFLY PATTGRNVDE 
VLRVVDALQK SAAHPVATPA NWKSGEPVAI SPSVSDDDAR KMFPQGYQTA DLPSKKGYLR FVNV* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 40 first AA are missing.
DNA
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CTCTCTCGCA ACAGGTGACT TCACGCCTGT GTGCACCACA GAGCTGGGAA AGATGGCATC CTACGCAGAG GAGTTCGAGA GGCGCGGAGT GAAGCTGCTG GGCCTCTCCT GCGACGACCT  CCACTCCCAC CAAGAGTGGA TCAAGGACAT CGAAGCCTAC ACGGTTCTCT CTCTACTCTC TCACCTCTCT CTGCTGTTTC CATCTCTCTG TGAGTGATGG TAGCCAGGAT GCAAAGTGGG  CTACCTGATT TTAGCCGACT GTCTCCATCT CTCTCTCTCT CTCTCTCTCT CTACTATCTC TCTCTCTAAC TTCTCTTTTA TGTGAGTTAT GATAAGCCGG GATGCAAAGT GGGGTACCCG  ATCGTAGCCG ACCCGAAGAG GGAGCTGCTG AAGGAGCTCA ACATGATGGA TCCCGACGAG AAGGACTCCG CCGGCGCCCA GCTCCCTTCC CGGGCCCTCC ACATCGTGGG CCCCGACAAG  AAGGTCAACT CCCTACAATC CCTAACCTCT CTCTCTCCCC CCCCACGTGG CATGGCGTTT GACTGCCACG GCGGCGGAGC AGGTTAAGTT GAGCTTCCTC TACCCAGCAA CGACGGGGAG  GAACGTGGAC GAGGTGCTGC GCGTGGTAGA TGCCCTCCAG AAGTCGGCCG CCCACCCGGT GGCGACGCCG GCGAACTGGA AGTCTGGCGA GCCGGTGGCG ATCTCGCCGT CGGTCTCCGA 
CGACGACGCC CGGAAGATGT TCCCGCAGGG ATACCAGACC GCCGACCTCC CCTCAAAGAA GGGCTATCTC CGTTTCGTCA ACGTCTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTCTCTCGCA ACAGGTGACT TCACGCCTGT GTGCACCACA GAGCTGGGAA AGATGGCATC CTACGCAGAG GAGTTCGAGA GGCGCGGAGT GAAGCTGCTG GGCCTCTCCT GCGACGACCT  CCACTCCCAC CAAGAGTGGA TCAAGGACAT CGAAGCCTAC ACGCCGGGAT GCAAAGTGGG GTACCCGATC GTAGCCGACC CGAAGAGGGA GCTGCTGAAG GAGCTCAACA TGATGGATCC  CGACGAGAAG GACTCCGCCG GCGCCCAGCT CCCTTCCCGG GCCCTCCACA TCGTGGGCCC CGACAAGAAG GTTAAGTTGA GCTTCCTCTA CCCAGCAACG ACGGGGAGGA ACGTGGACGA  GGTGCTGCGC GTGGTAGATG CCCTCCAGAA GTCGGCCGCC CACCCGGTGG CGACGCCGGC GAACTGGAAG TCTGGCGAGC CGGTGGCGAT CTCGCCGTCG GTCTCCGACG ACGACGCCCG 
GAAGATGTTC CCGCAGGGAT ACCAGACCGC CGACCTCCCC TCAAAGAAGG GCTATCTCCG TTTCGTCAAC GTCTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTCTCTCGCA ACAGGTGACT TCACGCCTGT GTGCACCACA GAGCTGGGAA AGATGGCATC CTACGCAGAG GAGTTCGAGA GGCGCGGAGT GAAGCTGCTG GGCCTCTCCT GCGACGACCT  CCACTCCCAC CAAGAGTGGA TCAAGGACAT CGAAGCCTAC ACGCCGGGAT GCAAAGTGGG GTACCCGATC GTAGCCGACC CGAAGAGGGA GCTGCTGAAG GAGCTCAACA TGATGGATCC  CGACGAGAAG GACTCCGCCG GCGCCCAGCT CCCTTCCCGG GCCCTCCACA TCGTGGGCCC CGACAAGAAG GTTAAGTTGA GCTTCCTCTA CCCAGCAACG ACGGGGAGGA ACGTGGACGA  GGTGCTGCGC GTGGTAGATG CCCTCCAGAA GTCGGCCGCC CACCCGGTGG CGACGCCGGC GAACTGGAAG TCTGGCGAGC CGGTGGCGAT CTCGCCGTCG GTCTCCGACG ACGACGCCCG 
GAAGATGTTC CCGCAGGGAT ACCAGACCGC CGACCTCCCC TCAAAGAAGG GCTATCTCCG TTTCGTCAAC GTCTGA 

Retrieve as FASTA