Entry information : SpolKat01 (Spipo11G0046100)
Entry ID 13253
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-19 (Christophe Dunand)
Peroxidase information: SpolKat01 (Spipo11G0046100)
Name (synonym) SpolKat01 (Spipo11G0046100)
Class Catalase     [Orthogroup: Kat001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolKat01
start..stop
S start..stop
NtKat03-1B 887 0 7..465 34..492
ZaKat01 886 0 7..465 34..492
EgrKat03 884 0 7..465 34..492
PpeKat01 882 0 7..465 34..492
Literature and cross-references SpolKat01 (Spipo11G0046100)
Protein sequence: SpolKat01 (Spipo11G0046100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   465
PWM (Da):   %s   54129.46  
PI (pH):   %s   7.87
Sequence
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Send to Peroxiscan
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YTHHAKIRQR GPILLEDYHL IEKIAQFDRE RIPERVVHAR GASAKGFFEV THDITHLTCA DFLRAPGVQT PVIVRFSTVI HERGSPETLR DPRGFAVKFY TREGNFDLVG NNFPVFFIRD  GMKFPDMVHA LKPNPVSHIQ ENWRILDFFS HHPESLHMFT FLFDDIGIPA DYRHMDGSGV NTYTLVNRAG KAHYVKFHWK PTCGVKSLLE EEAVVVGGTN HSHATKDLYD SIAAGNYPEW  KLYIQTIDPD HEDRFDFDPL DVTKTWPEDI IPLQPVGRLV LNKNIDNFFA ENEQLAFCPA IIVPGIYYSD DKLLQTRIFS YADTQRHRLG PNYLLLPPNA PKSAHHNNHH EGFMNFTHRD 
EEVNYFPSRY DPVRHAEQYP IPSRVLTGKR EKTVIKKENN FKQPGERYRS WAPDRQERFI RRWIEALSDP RVTHEIRSIW ISYWSQCDKS LGQKLATRLN VKPSM* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Two first exons are missing.
DNA
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TACACACACC ATGCTAAGAT CAGACAGAGA GAGAGAGAGA GCAGTGATTG ATGGAGCAAG TGATTATCAC AATGCGGGTG GGATCAGAGA CTGCGATGAT GAATGATGGT AATGGGGGCA  AAATTTCCTC GCAGGGCCGA TTCTTCTGGA GGATTACCAT CTGATCGAGA AGATCGCGCA GTTCGACAGG GAGCGGATCC CCGAGCGGGT CGTCCACGCC AGGGGAGCCA GCGCCAAGGG  CTTCTTCGAG GTCACCCACG ACATCACCCA CCTCACCTGC GCTGACTTCC TCCGCGCGCC GGGCGTCCAG ACCCCGGTGA TCGTGCGCTT CTCCACCGTC ATCCACGAGA GGGGGAGCCC  CGAAACCCTC AGGGACCCCC GCGGCTTCGC CGTCAAGTTC TACACCAGAG AGGTACGTGA GCTCGTGAAT AAACCTCGCC CTTTCGGAAT CATGGGCCAT AAACCTTCTT CCTTTTTTCT  TTTTTTTTTT TGTGTTTTTC TTCAGGGGAA TTTCGATCTC GTAGGGAACA ACTTCCCGGT GTTCTTCATC CGGGATGGGA TGAAGTTCCC CGACATGGTC CACGCTCTGA AGCCCAACCC  GGTGTCGCAC ATCCAGGAGA ACTGGAGGAT CCTCGACTTC TTCTCCCACC ACCCGGAGAG CCTCCACATG TTCACCTTTC TCTTCGACGA CATCGGCATC CCCGCTGACT ACAGGCACAT  GGACGGCTCC GGGGTCAACA CCTACACCCT GGTCAACAGG GCGGGGAAGG CCCACTACGT GAAGTTCCAC TGGAAGCCCA CTTGCGGGGT GAAGTCCCTG CTGGAGGAGG AAGCCGTGGT  GGTCGGAGGC ACCAACCACA GCCACGCCAC CAAGGACCTC TACGACTCCA TTGCCGCCGG AAACTACCCA GAGTGGAAGC TCTACATTCA GACCATCGAC CCGGACCACG AGGACAGGTT  TGACTTTGAC CCACTTGACG TCACCAAGAC CTGGCCCGAA GACATCATCC CCCTCCAGCC GGTGGGCCGT CTGGTCCTGA ACAAGAACAT CGACAACTTC TTCGCGGAGA ACGAGCAGCT  GGCCTTCTGC CCGGCGATCA TCGTCCCCGG GATCTACTAC TCAGACGACA AGCTCCTGCA GACCAGGATC TTCTCCTATG CAGACACCCA GAGGCACCGT CTCGGACCCA ACTACCTGCT  GCTGCCGCCC AATGCCCCCA AATCCGCGCA CCACAACAAC CACCACGAGG GCTTCATGAA CTTCACGCAC CGGGATGAGG AGGTAGTAGA ATAATATTGA TCACCCTTTT ATGCGCCGTC  GGTCCCTCGG CGGCAAGTGA TTTGATGAGT CTCCGCTCTC TCAGGTCAAC TACTTCCCCT CGAGGTACGA CCCTGTTCGA CATGCGGAGC AGTACCCAAT TCCTTCCCGT GTTCTTACTG  GTAAACGTGA GAAGGTGAGC TCCGATCGGC TGCAGCTTAG TGTTATTATA AAAGCTCAAA TGCACTGCCC CACCATATGC CAGGTATTCA TGCTGTATAT TTCCGTTGAC TGCAGACTGT  TATCAAGAAG GAGAACAACT TCAAGCAGCC CGGAGAGAGG TACCGGTCTT GGGCGCCTGA CAGGTAATGC CCAGCTCACA TCTCAATCCT CAATGCTTTC ATCTGGATTA TTGTCGTCCT  CAACAGCTGG GGGATCCCCT TCCTCTCCTC TGTGTCTGTC TCAGGCAAGA GCGATTCATC CGGAGGTGGA TCGAGGCGCT CTCCGACCCC AGGGTCACCC ACGAAATCCG GAGCATCTGG  ATCTCATACT GGTCACAGGT GAGAGCCTCC CTAAGAAATT CCTTGTTCTC AGTTCATATC CTGGTCCATC CGATCATAGA ATCATAAGTT GAGTTCTACC ATGAGCATTG CCTTGTTTCA 
GTCTAATCCC TGGTTGTGTG ACTGATGCTG CAGTGTGACA AGTCCCTGGG CCAGAAACTG GCCACTCGCC TCAACGTGAA GCCCAGCATG TGA 

Retrieve as FASTA  
CDS
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TACACACACC ATGCTAAGAT CAGACAGAGA GGGCCGATTC TTCTGGAGGA TTACCATCTG ATCGAGAAGA TCGCGCAGTT CGACAGGGAG CGGATCCCCG AGCGGGTCGT CCACGCCAGG  GGAGCCAGCG CCAAGGGCTT CTTCGAGGTC ACCCACGACA TCACCCACCT CACCTGCGCT GACTTCCTCC GCGCGCCGGG CGTCCAGACC CCGGTGATCG TGCGCTTCTC CACCGTCATC  CACGAGAGGG GGAGCCCCGA AACCCTCAGG GACCCCCGCG GCTTCGCCGT CAAGTTCTAC ACCAGAGAGG GGAATTTCGA TCTCGTAGGG AACAACTTCC CGGTGTTCTT CATCCGGGAT  GGGATGAAGT TCCCCGACAT GGTCCACGCT CTGAAGCCCA ACCCGGTGTC GCACATCCAG GAGAACTGGA GGATCCTCGA CTTCTTCTCC CACCACCCGG AGAGCCTCCA CATGTTCACC  TTTCTCTTCG ACGACATCGG CATCCCCGCT GACTACAGGC ACATGGACGG CTCCGGGGTC AACACCTACA CCCTGGTCAA CAGGGCGGGG AAGGCCCACT ACGTGAAGTT CCACTGGAAG  CCCACTTGCG GGGTGAAGTC CCTGCTGGAG GAGGAAGCCG TGGTGGTCGG AGGCACCAAC CACAGCCACG CCACCAAGGA CCTCTACGAC TCCATTGCCG CCGGAAACTA CCCAGAGTGG  AAGCTCTACA TTCAGACCAT CGACCCGGAC CACGAGGACA GGTTTGACTT TGACCCACTT GACGTCACCA AGACCTGGCC CGAAGACATC ATCCCCCTCC AGCCGGTGGG CCGTCTGGTC  CTGAACAAGA ACATCGACAA CTTCTTCGCG GAGAACGAGC AGCTGGCCTT CTGCCCGGCG ATCATCGTCC CCGGGATCTA CTACTCAGAC GACAAGCTCC TGCAGACCAG GATCTTCTCC  TATGCAGACA CCCAGAGGCA CCGTCTCGGA CCCAACTACC TGCTGCTGCC GCCCAATGCC CCCAAATCCG CGCACCACAA CAACCACCAC GAGGGCTTCA TGAACTTCAC GCACCGGGAT  GAGGAGGTCA ACTACTTCCC CTCGAGGTAC GACCCTGTTC GACATGCGGA GCAGTACCCA ATTCCTTCCC GTGTTCTTAC TGGTAAACGT GAGAAGACTG TTATCAAGAA GGAGAACAAC  TTCAAGCAGC CCGGAGAGAG GTACCGGTCT TGGGCGCCTG ACAGGCAAGA GCGATTCATC CGGAGGTGGA TCGAGGCGCT CTCCGACCCC AGGGTCACCC ACGAAATCCG GAGCATCTGG 
ATCTCATACT GGTCACAGTG TGACAAGTCC CTGGGCCAGA AACTGGCCAC TCGCCTCAAC GTGAAGCCCA GCATGTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TACACACACC ATGCTAAGAT CAGACAGAGA GGGCCGATTC TTCTGGAGGA TTACCATCTG ATCGAGAAGA TCGCGCAGTT CGACAGGGAG CGGATCCCCG AGCGGGTCGT CCACGCCAGG  GGAGCCAGCG CCAAGGGCTT CTTCGAGGTC ACCCACGACA TCACCCACCT CACCTGCGCT GACTTCCTCC GCGCGCCGGG CGTCCAGACC CCGGTGATCG TGCGCTTCTC CACCGTCATC  CACGAGAGGG GGAGCCCCGA AACCCTCAGG GACCCCCGCG GCTTCGCCGT CAAGTTCTAC ACCAGAGAGG GGAATTTCGA TCTCGTAGGG AACAACTTCC CGGTGTTCTT CATCCGGGAT  GGGATGAAGT TCCCCGACAT GGTCCACGCT CTGAAGCCCA ACCCGGTGTC GCACATCCAG GAGAACTGGA GGATCCTCGA CTTCTTCTCC CACCACCCGG AGAGCCTCCA CATGTTCACC  TTTCTCTTCG ACGACATCGG CATCCCCGCT GACTACAGGC ACATGGACGG CTCCGGGGTC AACACCTACA CCCTGGTCAA CAGGGCGGGG AAGGCCCACT ACGTGAAGTT CCACTGGAAG  CCCACTTGCG GGGTGAAGTC CCTGCTGGAG GAGGAAGCCG TGGTGGTCGG AGGCACCAAC CACAGCCACG CCACCAAGGA CCTCTACGAC TCCATTGCCG CCGGAAACTA CCCAGAGTGG  AAGCTCTACA TTCAGACCAT CGACCCGGAC CACGAGGACA GGTTTGACTT TGACCCACTT GACGTCACCA AGACCTGGCC CGAAGACATC ATCCCCCTCC AGCCGGTGGG CCGTCTGGTC  CTGAACAAGA ACATCGACAA CTTCTTCGCG GAGAACGAGC AGCTGGCCTT CTGCCCGGCG ATCATCGTCC CCGGGATCTA CTACTCAGAC GACAAGCTCC TGCAGACCAG GATCTTCTCC  TATGCAGACA CCCAGAGGCA CCGTCTCGGA CCCAACTACC TGCTGCTGCC GCCCAATGCC CCCAAATCCG CGCACCACAA CAACCACCAC GAGGGCTTCA TGAACTTCAC GCACCGGGAT  GAGGAGGTCA ACTACTTCCC CTCGAGGTAC GACCCTGTTC GACATGCGGA GCAGTACCCA ATTCCTTCCC GTGTTCTTAC TGGTAAACGT GAGAAGACTG TTATCAAGAA GGAGAACAAC  TTCAAGCAGC CCGGAGAGAG GTACCGGTCT TGGGCGCCTG ACAGGCAAGA GCGATTCATC CGGAGGTGGA TCGAGGCGCT CTCCGACCCC AGGGTCACCC ACGAAATCCG GAGCATCTGG 
ATCTCATACT GGTCACAGTG TGACAAGTCC CTGGGCCAGA AACTGGCCAC TCGCCTCAAC GTGAAGCCCA GCATGTGA 

Retrieve as FASTA