Entry information : SpolGPx01 ( Spipo16G0036900)
Entry ID 13255
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2016-02-23 (Christophe Dunand)
Peroxidase information: SpolGPx01 ( Spipo16G0036900)
Name (synonym) SpolGPx01 ( Spipo16G0036900)
Class Plant glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolGPx01
start..stop
S start..stop
SpolGPx02 87 8e-26 1..44 1..44
SpolGPx04 77 2e-20 1..44 1..44
BnGPx06-1_other 75 1e-19 1..44 1..44
BrGPx06-1Ab_other 75 1e-19 1..44 1..44
Literature and cross-references SpolGPx01 ( Spipo16G0036900)
Protein sequence: SpolGPx01 ( Spipo16G0036900)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   44
PWM (Da):   %s   4457.32  
PI (pH):   %s   10.03
Sequence
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Send to Peroxiscan
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MASASAQSPK SVHDFTVKDA RGNDVNLGAY KGKALLIVNV ASQC 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Only exons 1 and 2 due to N in the sequence. incorrect prediction from Phytozome
DNA
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ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGTACCT CGAAGATGGG CCTTGGATGA TGTTGAGTAT AGTTTTGGGT TTTCGAGTCC CTATTTCTTC  TCGATGGCTC TGGTGTTCAA TAGTTTTTCG GTAGATTTAC TGCTGCTTGG GCTATGCGAC ATTTTGATTT GCTGAAAGTC AGAGGCCGTT CGGTGATCGT TTGTTTGTAA TACGAACCAG  GACAGTCAGG ATGATTTTGG GTTCTATGAA AATGGGTTTG AGGGACTTGA CGGGCAATCT GCAAGATATA TGTCTGCAAG TTCTTTATTC CTAAAGTGAT AGGGAGAGGG CATGTGAGAA  TCACTGAGAG TAGATTGACT ATATGTTGGT AACATGATGT ATTCCGAGAC CAGGATGAGA AATCTAAGAT TTGAAGGTGC AGTTTTTTTT ACCATATGCG TGCTTGGGGT AATGGTATGT  TAATAAACTC CTTGACGTAA TATGTTTAAT TATGAGTTTG ACTTCATTTC ATCTTGCAGC TGCTAGATTT AAGGGATGTA GATCTTTTCT AAGCAATAGG TTTGAAAATA CTTTCCAGTT  TGAGATTTGG GAGATTTGAA CTTTTAGACT TAAGATGTTT ATTTTAAACT AAGGTATTGA TAATTTTTTT CATCCCTGTA AAAACTATGC GTGATATATC TTGGATTTAT GTATTGGCTA  TCTAAATTTG AAGGATCAAA AAGACTGACC AAGGAAGAGT TGGTGAATGG GTTGCATTTT TTGACCACCA AAATGAATTT GTCCGGACTG TGCTTTTCGA TTACGACGCA AAATCAAAGT  TGATGCGTCC TTAATTATGA GAGATCGATT GTCATGTCCA TGGTACATTA TCCATAATTT TTTCGATCAT CCTGTCCTAA ATGATAGATT ATTTCTCAAT GTAATATTAT GAAATTTATT  TGGGAGAAGG ACATGGTCAT CTTGTTCCTT TAGGGATTAA TACTTCCTGT AGATCTACTT GATTTAAATT CCTGGGTTCA TCTGTGTGAA TAGAAATGTG TGCCTTTGTA TGTATGCTTA  TATGTGATTT GTTTGTGTGA CTGTGGCCAT CAATGTTCAT GTTCAGATGC GCATGTGAAT ATATGATTGG CTGTTATTCA TATACTTATA TCTTATGTAT ATATGTATAT ATATAGATAT  TTATGCACAT ATATATCTAC ATACACGCAC AGGTTAATGT ATGTATATAT GCAGCTACCA TTTGTCTGTG TATCATTGAA TGCATTGCCT GCCTTGGATA TCATGGTCTT GCTCCTTAGG  GATCAGAGCT TTAGTTGAAG ACATGCTTTT ATTTTATATA TATTCTGGGT TAATTCGTGG GATATACTTC ACGTTTGTCT CTGAACTCTT TACTCCCAGA AAGGCATGTT ATGGAAATCG  ATGGAGTTAA TAACCTTATT ATTTTTCTTC ATTGTAAATT CCTCATGTAA GGTCTGAATG GATTATCTGT TTGCCTTTTG GATAAGGAAA CTAATCAGCT CTCATACAGG ACGCCAGGGG  CAATGACGTC AACCTAGGGG CCTACAAAGG GAAGGCACTT CTGATCGTCA ATGTTGCATC ACAATGGTAT CGTCTCTGTC TTCTCTCTTT TTAGAAATCT TGTTGGAGAG TTTAAATTAA 
AGCGTTAGTT CATGATTGTA GTG 

Retrieve as FASTA  
CDS
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ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGACGCC AGGGGCAATG ACGTCAACCT AGGGGCCTAC AAAGGGAAGG CACTTCTGAT CGTCAATGTT 
GCATCACAAT G 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTG CATCAGCCCA GTCGCCCAAG TCGGTTCACG ACTTCACCGT CAAGGACGCC AGGGGCAATG ACGTCAACCT AGGGGCCTAC AAAGGGAAGG CACTTCTGAT CGTCAATGTT 
GCATCACAAT G 

Retrieve as FASTA