Entry information : SpolGPx06 (Spipo5G0010700)
Entry ID 13260
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-06-19 (Christophe Dunand)
Peroxidase information: SpolGPx06 (Spipo5G0010700)
Name (synonym) SpolGPx06 (Spipo5G0010700)
Class Animal glutathione peroxidase    [Orthogroup: Gpx1002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolGPx06
start..stop
S start..stop
ZaGPx04 358 7e-127 1..238 1..241
TaGPx04-1B 316 2e-110 29..238 23..227
HvGPx04 311 1e-109 72..238 11..177
AoGPx04 313 1e-109 50..238 50..235
Literature and cross-references SpolGPx06 (Spipo5G0010700)
Protein sequence: SpolGPx06 (Spipo5G0010700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   244
PWM (Da):   %s   26904.79  
PI (pH):   %s   10.11
Sequence
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Send to Peroxiscan
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MASSATFATI LTSAASPRES WDRRNPARPA VASSCFPSRA PAGWQQISPL NCRFAASSSR LRVNGRLMRN SGVVHATAAA EKSIHDYTVK DIDGKNVSLS KFKGKVLLVV NVASRCGLTT  SNYMELSHIY DKYKTQGFEI LAFPCNQFGF QEPGSNQEIK QFACTRFKAE FPIFDKVDVN GPFTAPVYQF LKSSAGGFLG DLIKWNFEKF LVDKNGKVVE RYPPTTSPFQ IEKSEIKLGI 
RSL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from Phytozome (5'end is missing).
DNA
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ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT  CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG  GAGAAGTCCA TCCACGATTA CACCGTCAAG GTTGGATGGG ATCTCGTTGG CTCTGTTTTT TTTTGCCATC TCTCCCTCTC CGTCTATTTA TATCGCATAC GAATTATTTT TGTGCTTATG  AGTGAGAAAT TTTGATCAGG ATATCGACGG GAAGAATGTG TCTCTTAGCA AATTCAAGGG AAAAGTGCTA CTGGTCGTCA ATGTTGCTTC AAGATGGTAA TATATCGGGT TCTTTCTGTT  ATCAGTGAGC AGTGAGCTTT AATCATACTT GGAGATTATT TTTTCGCTGC ATTCTCATAG AGCAAATGTT TGATTCTCAA TGCCAGTGGC TTAACAACAT CCAATTACAT GGAGCTTTCA  CACATCTACG ACAAGTACAA GACTCAAGGT AGCAAACGCC CTAGGATTTT TTTCTTTTTT CTGTTGAAAA TGATGGGCAT TAATGAACTA GAAGCGATGA ATGTAACCAA GCCTCAGGCT  TGGAAGCTCA GCAAGGATAT AAATGGACTG GGTATCATTT GCAGGCTGTA GTTGGCCCCA ACCAAACTAC AGCCCACATA CAAGTTGTTC AACTTAGCTG AATTTGTGTT GTTTCTGTCG  ATCCTAGATC TAACCACAAA ATTAGGGCCC CAATCCAAGT CTAACGCTGC CCAAGGTTGA TCTCCACCCT GTAAATCCTT GCCGCGGAGC ACAATCAAAT GATTGTAATG GAAGTTGGGA  CAGGTCAGGC TCTGTTAAAG TTGAGAAATT TACACGGGAC GCAAGATTAA TACATCCATA TATTTACTTC AAGGTATGTT TTCAGTACAT GCACACAAAT ACATATATAC ATATCCAAGA  GGGGGTTTGA GTCAAGCTAT ACCAACCAAT TAGCTTTAAT CATCCTGTTG CGAGCTAAAA AAACCTGGCC CCAATTGAAA ATTTCGAAAA GTCAGAATCA CAGGAATTTT GCAAGAGCAT  CCTACATGAG AAATGGGCTT CTATTCTGTT AATTGGATTT GTGGTATTCC TGTTAAACAA AACTGAAACT TATTATCTTT TTGACTGAGG CATTAGCGAT TTTAAAGGGG TTCTGTGATT  TTAAATCCTG AACATTAGCT AGATGAACCA AACATGTGGA CAGTGGAGAG CTAAGTCAAA TGTGAAAATT TTCCTTTTAC TGGTATGAGA TGTCCCTAGT GTGACTTAGT AAAAGATAGA  CAAGTAAAGC CTTTGGCTTT CTCAAATATG TTAAATCTAA CGGAAAATTT TAAACTGGTT TTTGTGTATT GAAGAGTTAT CCTCTCAAAT TAGTGATGAT TTATTTTGGT TTCTGAAGTG  TCTTCTTCAA GATTATGAAC GTTAACGTGC AATGATTTGC GATGGAAAGG ATTATTTACT TGATTTAAAT GCAGGATTTG AGATTCTGGC ATTCCCTTGC AACCAATTTG GGTTTCAGGA  GCCGGGATCA AATCAAGAGA TAAAACAATT TGCTTGCACC AGGTTTAAAG CGGAATTCCC TATTTTCGAC AAGGTAACAC TGTCCACCGA ACACTTTGAG GAGTGTACCC TGTCTGATCT  CAGACACTAT ACAATCTGTA CATTTATATT CGCGTGCCAA CAACCTTATA AATGTGACGC CATACTTCAG GTTGATGTCA ACGGACCATT CACTGCACCA GTCTACCAGT TTCTGAAGTC  CAGCGCAGGT GGATTCTTGG GTGATCTGAT AAAGTGGAAC TTTGAGAAAT TCTTGGTCGA CAAAAATGGC AAGGTTGTGG AGAGATACCC ACCGACGACA TCACCTTTCC AGATTGAGGT  AACCATGCTT GACCCTGGCC AAGAAATCAT TCTAAAAAGT TATGTTTCTC AGAATTTTTT TTTCATTCAA ATCCATTTTT CGTTGTGCAC CTAACTGATT AAAATTAGCA AATATGTCAC  CTAGACTGTT TTACAAGCAG TCCAATGGTC ACCTATATCC TCTGCTTATA GGCACGAGAT ATTACCCAGG TTCCAGTTTT CACTATGGTG GTTCTCTCAC CTTCTCAGAA ATCTGAGATC 
AAATTGGGTA TTAGATCTCT TTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT  CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG  GAGAAGTCCA TCCACGATTA CACCGTCAAG GATATCGACG GGAAGAATGT GTCTCTTAGC AAATTCAAGG GAAAAGTGCT ACTGGTCGTC AATGTTGCTT CAAGATGTGG CTTAACAACA  TCCAATTACA TGGAGCTTTC ACACATCTAC GACAAGTACA AGACTCAAGG ATTTGAGATT CTGGCATTCC CTTGCAACCA ATTTGGGTTT CAGGAGCCGG GATCAAATCA AGAGATAAAA  CAATTTGCTT GCACCAGGTT TAAAGCGGAA TTCCCTATTT TCGACAAGGT TGATGTCAAC GGACCATTCA CTGCACCAGT CTACCAGTTT CTGAAGTCCA GCGCAGGTGG ATTCTTGGGT  GATCTGATAA AGTGGAACTT TGAGAAATTC TTGGTCGACA AAAATGGCAA GGTTGTGGAG AGATACCCAC CGACGACATC ACCTTTCCAG ATTGAGAAAT CTGAGATCAA ATTGGGTATT 
AGATCTCTTT AA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT  CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG  GAGAAGTCCA TCCACGATTA CACCGTCAAG GATATCGACG GGAAGAATGT GTCTCTTAGC AAATTCAAGG GAAAAGTGCT ACTGGTCGTC AATGTTGCTT CAAGATGTGG CTTAACAACA  TCCAATTACA TGGAGCTTTC ACACATCTAC GACAAGTACA AGACTCAAGG ATTTGAGATT CTGGCATTCC CTTGCAACCA ATTTGGGTTT CAGGAGCCGG GATCAAATCA AGAGATAAAA  CAATTTGCTT GCACCAGGTT TAAAGCGGAA TTCCCTATTT TCGACAAGGT TGATGTCAAC GGACCATTCA CTGCACCAGT CTACCAGTTT CTGAAGTCCA GCGCAGGTGG ATTCTTGGGT  GATCTGATAA AGTGGAACTT TGAGAAATTC TTGGTCGACA AAAATGGCAA GGTTGTGGAG AGATACCCAC CGACGACATC ACCTTTCCAG ATTGAGAAAT CTGAGATCAA ATTGGGTATT 
AGATCTCTTT AA 

Retrieve as FASTA