Entry information : SpolRboh01 (Spipo0G0033500)
Entry ID 13261
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-06-19 (Christophe Dunand)
Peroxidase information: SpolRboh01 (Spipo0G0033500)
Name (synonym) SpolRboh01 (Spipo0G0033500)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolRboh01
start..stop
S start..stop
VvRboh07 1090 0 1..837 1..812
PtRboh09 1048 0 3..837 4..821
EgrRboh01 1028 0 36..845 32..829
SbRboh02 1027 0 42..845 67..911
Literature and cross-references SpolRboh01 (Spipo0G0033500)
Protein sequence: SpolRboh01 (Spipo0G0033500)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   845
PWM (Da):   %s   94373.54 Transmb domain:   %s   o373-395i509-531o562-584i736-753o
PI (pH):   %s   9.56
Sequence
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Send to Peroxiscan
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MRTPSSGGSS FQRSPSDRMF ADLLAMDHHG SDDSSGSLGG AMPPEFLRGD LVEVMLELDA ESAFVRSVTP TSVGLLAAGE GTSGNLSRCS STESKIRRKF PWLRSPSPRR SRSSSPWLRD  LQDPAVIAAR DARRNKARLD RTRSGAQQAL KGLRFIRTQT AAAGGAGDAD ALWRAVEERF HALSKDGLLS RDDFGECIGM VDSEEFAKGI FDALARRRRQ NLERITKEEL RDFWLQISDQ  SFDARLQIFF DMYAVDTNVD GRITREEVQE LIILSASANK LSKLKEQAEE YAALIMEELD PEDLGYIELW QLEALLLQRD YYMNYSRPLS VASMGWSQSL PGGAASMGWW LVRPITLVRR  LGHRLRWSAQ EHWQRAWVLL LWFATMASLF TWKFVQYRRR PEFHVMGYCL PSAKGAAETL KLNMALVLLP VCRNTLTWLR STRARLFVPF DDNINFHKMI AGAIVGGILL HAGNHLACDF  PRVIDATPAQ FEQVLVADFG EKKPTYGSFV GSVEGVTGIL MVVLMALAFT LATSWFRKSA LRLPAPLNRL TGFNAFWYSH HLLAVVYLLL IIHGFFMHLV HHWYQKTTWM YMALPLLLYL  GERTLRTLRS EASTVKILKV SVLPGNVLTV VMSKPPGFRY KSGQYIFLKC PAISPFEWHP FSITSAPGDG HLSVHIRTLG DWTQELRRVF TEANSAAMIG RGTFSEVGTV PQKRVPRLLV  DGPYGAPAQN YKSYDVLLLV GLGIGATPFI SILRDLLNNI RAAEEQLSSY TDTSRSDDGV TGIGYTWSGG GGGGGGSGSK KRAQRTTSAH FYWVTREPGS FEWFKGVMNE VAEMDQKVNA 
LHIHL 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from Phytozome (missing intron, bad 3' prediction due to N).
DNA
Send to BLAST
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ATGAGGACGC CGTCGTCAGG GGGGAGCAGC TTCCAGAGGT CGCCCAGCGA CCGGATGTTC GCGGACTTGC TCGCCATGGA CCACCACGGC TCCGACGACA GCAGCGGGAG CTTGGGGGGG  GCAATGCCGC CGGAATTCCT CCGGGGCGAC CTCGTGGAGG TGATGCTGGA GCTCGACGCG GAGTCGGCCT TCGTGCGCAG CGTCACCCCC ACCTCCGTCG GCCTCCTCGC CGCCGGCGAG  GGGACGTCGG GGAATCTCAG CCGGTGCTCG TCGACGGAGT CGAAGATCCG CCGCAAGTTC CCCTGGCTGC GCTCGCCCTC CCCGCGGAGG TCGAGGAGCT CGTCGCCGTG GTTGCGAGAC  CTGCAGGACC CGGCGGTGAT CGCCGCCCGT GACGCGAGGC GGAACAAGGC GCGGCTAGAC AGGACGAGGT CGGGGGCACA GCAGGCGCTC AAGGGCCTGC GCTTCATCCG AACCCAGACC  GCCGCCGCCG GCGGCGCAGG GGACGCCGAC GCCCTCTGGC GCGCTGTGGA GGAGCGTTTC CACGCCCTCT CCAAGGACGG CCTTCTCTCC CGCGACGACT TTGGAGAATG TATAGGTACT  CTCGTCGTCC TCCTCTTCCT CTTCCTGTCC TTCTTCTTCT TCTTCTTCTG AATGTGGGGG GATGTGGGCA GGGATGGTGG ATTCGGAGGA GTTCGCCAAG GGGATCTTCG ACGCGCTGGC  GCGGCGGCGG CGGCAGAACC TGGAGCGGAT CACCAAGGAG GAGCTCCGGG ACTTCTGGCT GCAGATCTCC GACCAGAGCT TCGACGCCCG CCTGCAGATC TTCTTCGACA TGTATGCGTG  AGATCGGAGC CTCCATTTTT CTCCGGCTAA TTTCTCCGAC TATAATAAGC TGATGCTATT AATGGCCTAG GGTGGACACC AACGTGGACG GGAGGATCAC GAGGGAGGAG GTGCAAGAGG  TCCGCTTCTC CCCTTCCTCC TCCTCCATTC TCCTCCTCCT CCTCCTCTCC TCCTCCTCCT CCTTCCTTGA TGGGAGCTGT TTCTTTTAAA AGCTGATCAT ACTCAGCGCG TCGGCCAACA  AGCTGTCCAA GCTCAAGGAG CAGGCGGAGG AGTACGCCGC CCTCATCATG GAGGAGCTCG ACCCCGAGGA CCTCGGCTAC ATCGAGGTGC TGACCATTCC AACCCCCCTA CTGTAGCGTC  TTCCCCTCCC TGTTCCTGCT CCAACTTCTC TCCCTCTCTG GTTTTGGTCA TCGCCAGCTG TGGCAGCTGG AGGCGCTGCT GCTGCAGAGG GACTACTACA TGAACTACAG CCGCCCGCTG  AGCGTCGCCA GCATGGGGTG GAGCCAGAGC CTCCCCGGCG GCGCCGCCAG CATGGGGTGG TGGCTCGTGC GCCCCATCAC GCTGGTCCGG CGGCTGGGCC ACCGGCTCCG CTGGTCGGCC  CAAGAACACT GGCAGCGGGC GTGGGTTCTC CTCCTCTGGT TCGCCACCAT GGCGAGCCTC TTCACCTGGA AGTTCGTCCA GTACCGCCGC CGCCCCGAGT TCCACGTCAT GGGCTACTGC  CTCCCCTCCG CCAAGGGCGC CGCCGAGACC CTCAAGCTCA ACATGGCCCT CGTCCTCCTC CCCGTCTGCC GCAACACCCT CACCTGGCTC CGCTCCACCC GCGCCCGCCT CTTCGTCCCC  TTCGACGACA ACATCAACTT CCACAAGGTA CGTACAGTTG GTCGGCCGCT GTTTCTCCTC CTCCTCGGCG GCGCCGCCGG GAACATCCAG TGGCTGACCC GGCGGGATGA TGTGCAGATG  ATCGCGGGGG CCATCGTCGG GGGCATCTTG CTGCACGCCG GGAACCATCT GGCATGCGAC TTCCCGAGGG TGATCGACGC GACGCCGGCG CAGTTCGAAC AAGTCCTGGT AGCGGACTTC  GGGGAGAAGA AGCCGACGTA CGGGAGCTTC GTCGGCAGCG TGGAGGGGGT GACGGGGATA CTGATGGTCG TCCTCATGGC GCTGGCCTTC ACCCTCGCCA CCAGCTGGTT CCGGAAGAGC  GCCCTGCGGC TGCCGGCGCC CCTCAACAGG CTGACCGGCT TCAACGCCTT CTGGTACTCC CACCACCTGC TCGCCGTCGT CTACCTCCTG CTCATCATCC ACGGTTTCTT CATGCACCTC  GTCCACCACT GGTACCAGAA GACGGTGAGC TCTCGCCATC TCTCCACCAC CACCGCGCTC TGAGCCCTCC CTGCTGCCCA CGCCACCCCT CCGGCCCGTC GAATCGGAGG CCAAGGCACA  TGGCGCTGCC GCCCTTCGGA TCGACTGCGC CATTAATGGA GGAAAACGAT GCCCAAAATC GCAATCAGTG TGCTGTGCGA TTCTTACCTC TCTCCTGGTT TTCTTGCTCT GGTGGCACAG  ACGTGGATGT ACATGGCCTT GCCGCTGCTG CTCTACCTGG GTGAGCGCAC CCTGCGGACC CTGCGCTCCG AGGCCTCCAC CGTCAAGATC CTCAAGGTAC CGTGCCCCCT CCACCGCCAT  TAATGGCCGC CCCTCGCAGG AGTAACCAGC GGCTTCCCCC CTCCCTCTTC CTGCAGGTCT CTGTTCTGCC GGGGAATGTC CTGACGGTGG TGATGTCCAA GCCCCCCGGT TTCCGGTACA  AGAGCGGGCA GTACATCTTC CTCAAGTGCC CGGCCATCTC CCCCTTCGAA TGGTAGGTAA CTCTCGCCGG CGGGCCGGCC GGCCAACTCA GCGGCGCCGC CGCCTTCTTC CCTCACCCTC  GGAGTTCCCC TCCCGCAGGC ACCCTTTCTC CATCACCTCC GCCCCCGGCG ACGGCCACCT CAGCGTCCAC ATCCGGACGC TCGGCGACTG GACGCAGGAG CTCCGGAGGG TCTTCACCGA  GGCCAACAGC GCCGCCATGA TCGGCAGGGG AACCTTCAGC GAAGTGGGCA CCGTGCCGCA GAAGAGGTGA GCTCCCCGCC CCCTCAGACA TCGTCTCTGC TCCTCTTCTC TGCTCCTCCT  GAGACGGCGG CGGCGGCGGC GGTCCTCTTC TTCCGCAGAG TGCCGAGGTT GCTGGTGGAC GGCCCCTACG GCGCCCCCGC GCAGAACTAC AAGAGCTACG ACGTCCTCCT CCTGGTGGGA  CTGGGGATCG GCGCGACCCC TTTCATCAGC ATCCTCCGGG ACCTGCTCAA CAACATCAGG GCCGCGGAGG AGCAACTGGT ACGCCCCCCC GCCCCGGCAA GAATTTACAG AGAGCGTTCG  TCTCCATGGA ACGCAGCGTC TGATCAACCT TCTCTGTGGC TCGTCGGGCA GGACTCGTCG TCTTACACGG ACACCAGCCG TTCGGACGAC GGCGTGACCG GCATCGGCTA CACTTGGAGC  GGCGGCGGCG GCGGCGGCGG CGGCAGCGGG AGCAAGAAGA GAGCTCAGAG GACGACCAGC GCACACTTCT ACTGGGTCAC GCGGGAGCCG GGATCCTTCG AGTGGTTCAA AGGGGTCATG 
AACGAAGTCG CGGAGATGGA TCAAAAGGTC AACGCCTTAC ACATTCATCT CCCTTTCTCT CTCTCTCTCT CCTC 

Retrieve as FASTA