Entry information : GhPrx39 (POX10)
Entry ID 13269
Creation 2015-06-22 (Christophe Dunand)
Last sequence changes 2015-06-22 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-05 (Achraf Jemmat)
Peroxidase information: GhPrx39 (POX10)
Name (synonym) GhPrx39 (POX10)
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhPrx39
start..stop
S start..stop
GrPrx39 670 0 1..323 1..323
CsPrx05 564 0 3..323 7..326
CclPrx38 558 0 11..323 1..313
MePrx119 545 0 5..323 1..318
Literature and cross-references GhPrx39 (POX10)
Literature Mei,W., Qin,Y., Song,W., Li,J. and Zhu,Y. Cotton GhPOX1 encoding plant class III peroxidase may be responsible for the high level of reactive oxygen species production that is related to cotton fiber elongation. J Genet Genomics 36 (3), 141-150 (2009)
Protein ref. GenBank:   ACJ11766.1
mRNA ref. GenBank:   FJ415220.1
Protein sequence: GhPrx39 (POX10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   35592.41 Transmb domain:   %s   o10-32i
PI (pH):   %s   5.22
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVLNLVKMIT MANMLSMFIL MEVVAGGFRF GVDGLRMDYY IMSCPFAESI VKNTVNRALQ DDPTLAAALV RMHFHDCFVE GCDGSILIDS TKDNTAEKDS PGNLSLRGYE VIDDAKEQLE  DQCPGIVSCA DIVAMAARDA IFWSEGPVYD IPKGRKDGRR SKIEDTINLP FPTFNTSELI SAFGKRGFSA QEMVALSGAH TLGVARCSSF KNRLSNADAN LDSNFAKTLS KTCSAGDNAE 
QPFDATQNTF DNFYFNALIR KSGVLFSDQV LYTTPRTRNI VNGYAMNQAM FFFDFQQAMV KMGKVDVKEG SNGEVRQNCR KIN 

Retrieve as FASTA  
Remarks Complete sequence from cDNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGTTGA ACTTAGTGAA GATGATAACG ATGGCTAATA TGCTAAGTAT GTTTATATTA ATGGAGGTTG TGGCGGGTGG GTTTCGATTT GGAGTTGATG GTCTTCGCAT GGACTACTAC  ATAATGAGTT GCCCATTTGC TGAATCCATA GTGAAGAACA CTGTTAATAG AGCTTTGCAA GATGACCCAA CGTTGGCAGC AGCTTTGGTT AGGATGCATT TCCATGATTG CTTCGTTGAG  GGATGTGATG GCTCCATTCT GATTGACTCG ACCAAGGACA ACACAGCAGA AAAAGACTCA CCTGGAAACT TAAGCTTGCG AGGCTATGAA GTTATTGATG ATGCAAAGGA GCAGCTGGAA  GATCAGTGCC CTGGCATTGT CTCCTGTGCT GATATTGTTG CAATGGCTGC CAGAGATGCC ATTTTCTGGT CAGAGGGACC TGTGTATGAT ATACCAAAAG GAAGAAAAGA TGGAAGGAGG  TCCAAGATAG AAGACACCAT AAACCTGCCA TTCCCCACCT TCAACACCTC AGAGCTCATC AGCGCCTTCG GCAAGCGAGG TTTCAGTGCT CAAGAAATGG TTGCTTTATC TGGGGCACAT  ACGTTAGGAG TGGCAAGGTG TTCATCCTTC AAAAACAGAT TGAGTAACGC AGATGCTAAC CTGGATTCGA ATTTCGCCAA GACGTTGTCC AAGACATGCA GTGCCGGCGA CAACGCGGAG  CAACCGTTCG ATGCCACGCA AAACACCTTC GACAACTTCT ACTTCAACGC ATTGATAAGG AAAAGTGGGG TTCTTTTCTC GGATCAAGTA CTGTATACGA CGCCGAGAAC AAGAAACATT  GTGAATGGTT ACGCCATGAA CCAAGCTATG TTTTTCTTTG ATTTCCAGCA GGCAATGGTG AAAATGGGGA AGGTTGATGT TAAGGAAGGA TCTAACGGGG AAGTTCGACA GAATTGCCGC 
AAAATTAACT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACATGGACTG AAGGAGTAGA AAAAGCTAAG TGATCTCTCT TGAAGTAGTT GGTCATTGTA TATACATAAT GGTGTTGAAC TTAGTGAAGA TGATAACGAT GGCTAATATG CTAAGTATGT  TTATATTAAT GGAGGTTGTG GCGGGTGGGT TTCGATTTGG AGTTGATGGT CTTCGCATGG ACTACTACAT AATGAGTTGC CCATTTGCTG AATCCATAGT GAAGAACACT GTTAATAGAG  CTTTGCAAGA TGACCCAACG TTGGCAGCAG CTTTGGTTAG GATGCATTTC CATGATTGCT TCGTTGAGGG ATGTGATGGC TCCATTCTGA TTGACTCGAC CAAGGACAAC ACAGCAGAAA  AAGACTCACC TGGAAACTTA AGCTTGCGAG GCTATGAAGT TATTGATGAT GCAAAGGAGC AGCTGGAAGA TCAGTGCCCT GGCATTGTCT CCTGTGCTGA TATTGTTGCA ATGGCTGCCA  GAGATGCCAT TTTCTGGTCA GAGGGACCTG TGTATGATAT ACCAAAAGGA AGAAAAGATG GAAGGAGGTC CAAGATAGAA GACACCATAA ACCTGCCATT CCCCACCTTC AACACCTCAG  AGCTCATCAG CGCCTTCGGC AAGCGAGGTT TCAGTGCTCA AGAAATGGTT GCTTTATCTG GGGCACATAC GTTAGGAGTG GCAAGGTGTT CATCCTTCAA AAACAGATTG AGTAACGCAG  ATGCTAACCT GGATTCGAAT TTCGCCAAGA CGTTGTCCAA GACATGCAGT GCCGGCGACA ACGCGGAGCA ACCGTTCGAT GCCACGCAAA ACACCTTCGA CAACTTCTAC TTCAACGCAT  TGATAAGGAA AAGTGGGGTT CTTTTCTCGG ATCAAGTACT GTATACGACG CCGAGAACAA GAAACATTGT GAATGGTTAC GCCATGAACC AAGCTATGTT TTTCTTTGAT TTCCAGCAGG 
CAATGGTGAA AATGGGGAAG GTTGATGTTA AGGAAGGATC TAACGGGGAA GTTCGACAGA ATTGCCGCAA AATTAACTGA 

Retrieve as FASTA