Entry information : PlCcP04 (VJED-2012574 / LLEN-2043410 / NMAK-2007973 / RFAD-2003299)
Entry ID 13318
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2015-07-30 (Bruno Savelli)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-07-30 (Christophe Dunand)
Peroxidase information: PlCcP04 (VJED-2012574 / LLEN-2043410 / NMAK-2007973 / RFAD-2003299)
Name (synonym) PlCcP04 (VJED-2012574 / LLEN-2043410 / NMAK-2007973 / RFAD-2003299)
Class Cytochrome C peroxidase     [Orthogroup: CcP003]*
Taxonomy Eukaryota Pavlovaceae Pavlova
Organism Pavlova lutheri    [TaxId: 2832 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PlCcP04
start..stop
S start..stop
OCgrCcP02 416 4e-149 15..274 1..260
TpsCcP02 347 1e-120 9..275 70..342
IspCcP02 343 4e-120 15..272 1..260
EsilCcP01 337 3e-116 14..276 93..356
Literature and cross-references PlCcP04 (VJED-2012574 / LLEN-2043410 / NMAK-2007973 / RFAD-2003299)
Protein sequence: PlCcP04 (VJED-2012574 / LLEN-2043410 / NMAK-2007973 / RFAD-2003299)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   276
PWM (Da):   %s   29456.44  
PI (pH):   %s   10.19
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAAAAAAPKR KLSEYQKAAV EIKQLVKADP NKGPTLVRLA WHSSGTYDKA QRDGGSGPGT IRFKEELAHG ANAGLGAAVG WLEPIKRKHP KLSYADLFTL AGVVSIVQMG GPAVPWKSGR  VDGKPAQVTP DGRLPAADKG APKATAAALR QTFGRMGFND QEIVALSGAH ALGRCHPDAS GYAGPWTPTP TLLTTAYYSL LLNEKWTPKK WDGPLQYEER SGKLMMLPSD LTLVQDARFA 
KYVRLYAKDS KRFYADFSAA FAKLLELGAE GLTPTS 

Retrieve as FASTA  
Remarks One combined librarie from 3 independant libraries obtaiend from 3 different strains (UTEX_LB_1293, SAG_926_1, CCAC_0028) => some mismatches for CCAC_0028
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCGGCGGCGG CGGCGGCCGC GCCGAAGCGC AAGCTCTCCG AGTACCAGAA GGCGGCGGTT GAGATCAAGC AGCTGGTCAA GGCCGACCCG AACAAGGGCC CAACTCTCGT CCGCCTCGCG  TGGCACTCGT CCGGCACGTA CGACAAGGCG CAGCGCGACG GCGGCTCGGG CCCTGGCACG ATCCGCTTCA AGGAGGAGCT GGCGCACGGC GCGAACGCCG GGCTTGGCGC GGCGGTTGGC  TGGCTCGAGC CGATTAAGCG TAAGCACCCC AAGCTCTCGT ACGCCGACCT GTTCACGCTC GCCGGCGTCG TGTCGATCGT TCAGATGGGC GGCCCGGCCG TGCCATGGAA GAGCGGCCGC  GTTGACGGCA AGCCAGCGCA GGTCACGCCG GACGGGCGGC TGCCCGCCGC CGACAAGGGC GCGCCCAAGG CGACCGCCGC CGCGCTGCGC CAGACCTTTG GCCGCATGGG CTTCAACGAT  CAGGAGATTG TCGCGCTCTC GGGCGCGCAC GCGCTTGGGC GCTGCCACCC CGACGCGTCG GGGTATGCAG GTCCGTGGAC GCCGACGCCG ACACTGCTCA CGACGGCATA CTACTCTCTG  TTGCTGAACG AGAAGTGGAC GCCCAAGAAA TGGGACGGCC CGCTGCAGTA CGAGGAGCGG AGCGGCAAAC TGATGATGCT CCCGTCCGAC CTCACGCTCG TGCAGGACGC GCGATTTGCA 
AAGTACGTGC GCCTGTACGC CAAGGACTCC AAGCGCTTCT ACGCCGATTT TTCCGCCGCT TTCGCCAAGC TCCTCGAGCT CGGCGCAGAG GGGCTCACGC CGACCAGT 

Retrieve as FASTA