Entry information : CmePrxQ03 ( CYME_CMI113C)
Entry ID 13350
Creation 2015-08-04 (Christophe Dunand)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-11 (Achraf Jemmat)
Peroxidase information: CmePrxQ03 ( CYME_CMI113C)
Name (synonym) CmePrxQ03 ( CYME_CMI113C)
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Bangiophyceae Cyanidiaceae Cyanidioschyzon
Organism Cyanidioschyzon merolae    [TaxId: 45157 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CmePrxQ03
start..stop
S start..stop
FjBCP01 135 8e-42 10..152 6..147
SeBCP01_PCC6301 132 1e-40 10..146 6..141
PtorBCP01 132 2e-40 9..145 5..140
PpaPrxQ02 132 1e-39 10..146 76..211
Literature and cross-references CmePrxQ03 ( CYME_CMI113C)
Literature Nozaki,H.,A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. BMC Biol. 5, 28 (2007)
Protein ref. GenBank:   BAM80003.1   M1VGW4
DNA ref. GenBank:   NC_010135.1 (320631..321110)
mRNA ref. GenBank:   XM_005536232.1
Cluster/Prediction ref. Genebank:   16993823
Protein sequence: CmePrxQ03 ( CYME_CMI113C)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   159
PWM (Da):   %s   17330.95  
PI (pH):   %s   8.76
Sequence
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Send to Peroxiscan
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MSSEQAPTKG QLAPVIRATD HNGTLVDTES VRGQRPVVVF FFPRAFTVGC TREACAFRDS YSAFETLNAM VVGVSADSPQ VLREFAQQHK LPFHLVSDTD GSLRKLFQVP RSLFGLLSGR 
VTYVIGRSGR ILDIFNSQLS WTEHVNVAKK AIAAEEAAT 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 9, no intron).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGTTCGG AACAAGCTCC AACCAAGGGG CAGCTTGCTC CTGTCATCAG GGCTACAGAC CATAACGGAA CGTTGGTGGA CACCGAGTCT GTGCGAGGTC AACGGCCCGT CGTGGTGTTC  TTCTTTCCGC GAGCGTTCAC CGTGGGCTGT ACCCGAGAAG CGTGCGCGTT CCGTGACTCT TATTCGGCTT TCGAAACTCT GAACGCAATG GTGGTAGGCG TATCAGCTGA TTCCCCACAG  GTTCTGCGGG AGTTCGCGCA GCAACATAAA CTTCCGTTCC ACCTTGTTTC GGATACCGAC GGGAGCCTGC GCAAACTCTT CCAAGTGCCC AGATCCCTGT TCGGTCTTCT TTCTGGGCGG  GTTACCTATG TCATCGGACG GAGCGGCCGC ATTCTGGATA TATTTAATAG TCAGCTCAGT TGGACCGAAC ACGTAAACGT GGCGAAGAAG GCTATCGCTG CAGAGGAGGC CGCTACATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGTTCGG AACAAGCTCC AACCAAGGGG CAGCTTGCTC CTGTCATCAG GGCTACAGAC CATAACGGAA CGTTGGTGGA CACCGAGTCT GTGCGAGGTC AACGGCCCGT CGTGGTGTTC  TTCTTTCCGC GAGCGTTCAC CGTGGGCTGT ACCCGAGAAG CGTGCGCGTT CCGTGACTCT TATTCGGCTT TCGAAACTCT GAACGCAATG GTGGTAGGCG TATCAGCTGA TTCCCCACAG  GTTCTGCGGG AGTTCGCGCA GCAACATAAA CTTCCGTTCC ACCTTGTTTC GGATACCGAC GGGAGCCTGC GCAAACTCTT CCAAGTGCCC AGATCCCTGT TCGGTCTTCT TTCTGGGCGG  GTTACCTATG TCATCGGACG GAGCGGCCGC ATTCTGGATA TATTTAATAG TCAGCTCAGT TGGACCGAAC ACGTAAACGT GGCGAAGAAG GCTATCGCTG CAGAGGAGGC CGCTACATGA 

Retrieve as FASTA