Entry information : CmeRboh02 ( CYME_CMR353C)
Entry ID 13352
Creation 2015-08-04 (Christophe Dunand)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-11 (Achraf Jemmat)
Peroxidase information: CmeRboh02 ( CYME_CMR353C)
Name (synonym) CmeRboh02 ( CYME_CMR353C)
Class Respiratory burst oxidase homolog    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Bangiophyceae Cyanidiaceae Cyanidioschyzon
Organism Cyanidioschyzon merolae    [TaxId: 45157 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CmeRboh02
start..stop
S start..stop
CmeRboh01 379 7e-118 94..729 20..614
CmeRboh01 88 5e-18 769..935 708..864
HaRboh09 105 3e-23 262..536 487..722
CcriRboh 102 2e-22 84..494 11..366
MtRboh08 101 3e-22 262..548 522..778
Literature and cross-references CmeRboh02 ( CYME_CMR353C)
Literature Nozaki,H. et al., A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. BMC Biol. 5, 28 (2007)
Protein ref. GenBank:   XP_005538587.1
DNA ref. GenBank:   NC_010144.1 (852084..854891)
mRNA ref. GenBank:   XM_005538530.1
Cluster/Prediction ref. Genebank:   16996993
Protein sequence: CmeRboh02 ( CYME_CMR353C)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   935
PWM (Da):   %s   104302.46 Transmb domain:   %s   i100-122o142-164i193-215o235-257i264-283o288-305i587-609o619-641i661-683o703-725i
PI (pH):   %s   9.88
Sequence
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Send to Peroxiscan
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MQRRAAVDAQ ECHDTRFSPN SGGAFGRAPN LAAAAAIQST PRHRRLSHVR IALVPRSFCF LDEVWMKPSL PPVPLGACAI TTMRPRNRIR AQLDLWNERV GESGLFFSLL VAYWCSQAWF  FVYGVKYALS LALPSDWSRY MLIFGRGFGY VATFNALLLP ITVNRTLTNI LYRLPLYDIF SVARWLPDLH AIIARWFTIA GWIHGILLSV AYGVGTLPFR GGFLPFSNTI PTTMVFVTGC  ALMAFLLAIV LLSLGSVRRR VYRVFWASHV PLAILTYAAL VFHGLRGGRL WSVYFFGLPV VLYILDRLYH SFAAAFTPHR VLSVELSHKN SNVVRLVLER RGRKFVAGQY FKLAWKFHVC  SHLAVAGEWH PFTVASSPLL DKDRIIFFIA ATGKWTNALR ALALQQHQQQ HDENLEHASS TSPTPKSLAT EAMPHAVDKS SITTCLPINR RWILLSGPYG APAQSHQNFA HQLLIGTGVG  ASPMFSIVQE LCGRATPCDN NNNKDASLEC SDVSTGGDLE NGTLASVSDT TSPTRESTDL PNFEKLKAST TANDSSSEVV PSVQALPPVL AARLGTLRGD TFLDRFSAAV LSNLWLFSIL  WICLADLTVS ICASAFSHIV AFIGSLALFV VILTMICLTV IADMRLSVNP PRWHYVLLLR GILLLLWFAV ALTNAVLCSL LIVEYFLASN DRMASISKSS EWLFVMVVTP VHITIFVLLL  FFFFLPRSWT WRTTVTAKVF RRCLQGSWDH QQRSNKVVSD ARNAEWNAFS HIRTVTFVWV VRYVEDLWFL EKLYELASQQ DASDPCRPRL RIHVHITRLG HDDADPVSSR LPANCGEILQ 
FHCGRPDFGE YVAELVNEDH DTTTPLAGRG KPGAPASIRR FQRTRAFSNK VHHGIFFCGG RSVVRSVHQS IRAVAAARAA RGLPQRNVFF MKENF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 18, no intron).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGCGGC GCGCCGCCGT CGACGCGCAA GAGTGCCACG ACACGCGTTT CTCACCCAAC TCGGGTGGTG CTTTCGGTAG AGCACCAAAT TTGGCCGCAG CAGCTGCGAT CCAAAGCACG  CCCCGGCACC GCAGGTTGAG CCACGTGCGG ATCGCCTTAG TACCTAGAAG TTTTTGTTTT TTGGACGAGG TATGGATGAA GCCTAGCTTA CCTCCTGTTC CGCTTGGAGC ATGTGCAATA  ACGACGATGC GGCCGAGAAA CCGAATACGA GCCCAGCTCG ACCTTTGGAA CGAAAGAGTC GGTGAATCGG GACTTTTTTT CTCTCTCCTA GTCGCGTACT GGTGTTCACA AGCGTGGTTC  TTCGTGTACG GCGTTAAATA TGCGCTTAGT CTGGCGCTTC CTTCCGATTG GTCTCGGTAT ATGCTGATCT TTGGCAGAGG TTTTGGATAC GTGGCAACGT TCAACGCGTT GCTTCTTCCT  ATAACCGTGA ACCGAACCCT GACCAATATC TTGTACAGGC TGCCTCTGTA CGATATTTTT AGCGTAGCCC GATGGTTGCC GGACCTGCAC GCAATCATCG CGCGCTGGTT CACAATCGCA  GGCTGGATCC ACGGCATCCT GCTGAGTGTC GCTTACGGCG TTGGGACGCT TCCGTTCCGC GGCGGCTTCT TGCCCTTTTC GAATACGATC CCCACGACGA TGGTTTTTGT AACCGGATGT  GCCCTGATGG CGTTTCTGCT AGCGATCGTG CTGCTCTCTC TGGGGAGCGT TCGTCGGCGA GTCTATCGCG TATTCTGGGC GAGTCATGTG CCGCTAGCGA TTCTTACCTA TGCGGCACTC  GTTTTCCATG GTCTACGGGG CGGCCGCCTC TGGTCCGTCT ATTTTTTTGG GTTGCCGGTC GTACTCTACA TACTGGATAG GCTGTATCAC AGCTTTGCTG CTGCCTTCAC GCCACATCGA  GTTCTGTCTG TGGAGCTGTC GCATAAGAAT TCGAATGTGG TTCGTCTTGT CCTGGAACGC AGGGGTCGCA AGTTCGTTGC CGGCCAATAC TTCAAACTGG CCTGGAAATT TCACGTTTGC  TCGCACCTGG CTGTCGCCGG AGAATGGCAT CCTTTCACAG TGGCCAGTTC ACCTTTGCTA GACAAAGATC GCATCATTTT TTTCATTGCC GCAACCGGGA AGTGGACGAA TGCATTGCGA  GCATTGGCTC TACAGCAACA CCAGCAACAG CATGACGAGA ATCTCGAACA CGCATCATCC ACGAGTCCGA CACCGAAATC CCTCGCTACT GAGGCAATGC CTCACGCTGT GGACAAGTCG  AGCATAACGA CGTGTTTGCC TATCAACCGC CGGTGGATTC TGCTTTCGGG GCCGTACGGC GCTCCTGCGC AGAGTCATCA GAACTTTGCG CACCAGCTGC TGATCGGCAC TGGCGTTGGT  GCCTCGCCAA TGTTCTCCAT CGTGCAGGAG CTCTGCGGTC GAGCGACGCC CTGCGACAAC AACAACAACA AAGACGCAAG CCTAGAATGC AGCGATGTGT CCACCGGAGG TGACCTTGAG  AACGGCACCC TTGCGTCGGT ATCCGATACG ACATCTCCGA CGAGGGAAAG CACCGACCTG CCCAACTTCG AAAAGCTGAA AGCGTCCACA ACAGCGAACG ATTCGAGCTC CGAAGTGGTT  CCGAGCGTGC AGGCTCTGCC GCCGGTGCTA GCGGCACGTC TGGGCACCCT GCGCGGTGAC ACTTTCCTGG ATCGCTTCTC CGCTGCGGTG CTCAGTAATC TGTGGCTCTT CTCTATCCTG  TGGATTTGTC TGGCCGACCT GACCGTGTCC ATCTGCGCGT CGGCGTTCAG TCACATTGTC GCATTCATTG GTAGCCTTGC TCTGTTCGTG GTCATCTTGA CGATGATTTG TCTGACCGTG  ATTGCGGATA TGAGGCTCAG CGTGAATCCG CCCCGCTGGC ACTACGTTCT GCTGCTACGA GGCATCCTGC TGCTGTTGTG GTTTGCGGTG GCTCTCACAA ACGCAGTCCT CTGTAGCCTG  CTTATCGTGG AGTACTTTCT GGCTTCCAAC GATCGCATGG CGAGCATCAG CAAGTCAAGC GAATGGCTCT TCGTGATGGT TGTGACCCCA GTGCACATTA CGATTTTCGT GCTTCTGCTT  TTCTTCTTCT TTCTACCGCG TTCATGGACC TGGCGCACGA CGGTAACAGC GAAAGTTTTC CGTCGTTGCT TGCAAGGCTC CTGGGACCAC CAGCAGCGTT CCAATAAAGT TGTGAGCGAC  GCTCGCAACG CGGAATGGAA CGCTTTCTCT CACATTCGCA CCGTAACGTT CGTCTGGGTA GTGCGCTACG TCGAAGACCT CTGGTTTCTC GAAAAGCTCT ATGAACTCGC TTCTCAGCAG  GATGCCAGTG ATCCGTGTCG ACCACGGTTA CGAATTCATG TTCATATTAC CCGACTTGGA CACGACGACG CCGATCCGGT AAGCAGCAGA CTCCCGGCGA ATTGCGGCGA GATTCTCCAG  TTCCATTGTG GTCGACCCGA CTTTGGCGAA TACGTCGCGG AATTGGTGAA CGAGGACCAC GACACCACGA CACCGCTAGC CGGACGCGGG AAACCGGGCG CACCTGCAAG CATCAGACGC  TTCCAACGCA CGCGAGCCTT CTCGAACAAA GTGCATCATG GCATCTTCTT TTGCGGCGGC AGGTCTGTTG TCCGCAGCGT GCACCAGAGC ATTCGTGCGG TAGCAGCGGC ACGGGCGGCT 
CGAGGTTTGC CTCAACGCAA TGTGTTCTTC ATGAAGGAGA ACTTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGCGGC GCGCCGCCGT CGACGCGCAA GAGTGCCACG ACACGCGTTT CTCACCCAAC TCGGGTGGTG CTTTCGGTAG AGCACCAAAT TTGGCCGCAG CAGCTGCGAT CCAAAGCACG  CCCCGGCACC GCAGGTTGAG CCACGTGCGG ATCGCCTTAG TACCTAGAAG TTTTTGTTTT TTGGACGAGG TATGGATGAA GCCTAGCTTA CCTCCTGTTC CGCTTGGAGC ATGTGCAATA  ACGACGATGC GGCCGAGAAA CCGAATACGA GCCCAGCTCG ACCTTTGGAA CGAAAGAGTC GGTGAATCGG GACTTTTTTT CTCTCTCCTA GTCGCGTACT GGTGTTCACA AGCGTGGTTC  TTCGTGTACG GCGTTAAATA TGCGCTTAGT CTGGCGCTTC CTTCCGATTG GTCTCGGTAT ATGCTGATCT TTGGCAGAGG TTTTGGATAC GTGGCAACGT TCAACGCGTT GCTTCTTCCT  ATAACCGTGA ACCGAACCCT GACCAATATC TTGTACAGGC TGCCTCTGTA CGATATTTTT AGCGTAGCCC GATGGTTGCC GGACCTGCAC GCAATCATCG CGCGCTGGTT CACAATCGCA  GGCTGGATCC ACGGCATCCT GCTGAGTGTC GCTTACGGCG TTGGGACGCT TCCGTTCCGC GGCGGCTTCT TGCCCTTTTC GAATACGATC CCCACGACGA TGGTTTTTGT AACCGGATGT  GCCCTGATGG CGTTTCTGCT AGCGATCGTG CTGCTCTCTC TGGGGAGCGT TCGTCGGCGA GTCTATCGCG TATTCTGGGC GAGTCATGTG CCGCTAGCGA TTCTTACCTA TGCGGCACTC  GTTTTCCATG GTCTACGGGG CGGCCGCCTC TGGTCCGTCT ATTTTTTTGG GTTGCCGGTC GTACTCTACA TACTGGATAG GCTGTATCAC AGCTTTGCTG CTGCCTTCAC GCCACATCGA  GTTCTGTCTG TGGAGCTGTC GCATAAGAAT TCGAATGTGG TTCGTCTTGT CCTGGAACGC AGGGGTCGCA AGTTCGTTGC CGGCCAATAC TTCAAACTGG CCTGGAAATT TCACGTTTGC  TCGCACCTGG CTGTCGCCGG AGAATGGCAT CCTTTCACAG TGGCCAGTTC ACCTTTGCTA GACAAAGATC GCATCATTTT TTTCATTGCC GCAACCGGGA AGTGGACGAA TGCATTGCGA  GCATTGGCTC TACAGCAACA CCAGCAACAG CATGACGAGA ATCTCGAACA CGCATCATCC ACGAGTCCGA CACCGAAATC CCTCGCTACT GAGGCAATGC CTCACGCTGT GGACAAGTCG  AGCATAACGA CGTGTTTGCC TATCAACCGC CGGTGGATTC TGCTTTCGGG GCCGTACGGC GCTCCTGCGC AGAGTCATCA GAACTTTGCG CACCAGCTGC TGATCGGCAC TGGCGTTGGT  GCCTCGCCAA TGTTCTCCAT CGTGCAGGAG CTCTGCGGTC GAGCGACGCC CTGCGACAAC AACAACAACA AAGACGCAAG CCTAGAATGC AGCGATGTGT CCACCGGAGG TGACCTTGAG  AACGGCACCC TTGCGTCGGT ATCCGATACG ACATCTCCGA CGAGGGAAAG CACCGACCTG CCCAACTTCG AAAAGCTGAA AGCGTCCACA ACAGCGAACG ATTCGAGCTC CGAAGTGGTT  CCGAGCGTGC AGGCTCTGCC GCCGGTGCTA GCGGCACGTC TGGGCACCCT GCGCGGTGAC ACTTTCCTGG ATCGCTTCTC CGCTGCGGTG CTCAGTAATC TGTGGCTCTT CTCTATCCTG  TGGATTTGTC TGGCCGACCT GACCGTGTCC ATCTGCGCGT CGGCGTTCAG TCACATTGTC GCATTCATTG GTAGCCTTGC TCTGTTCGTG GTCATCTTGA CGATGATTTG TCTGACCGTG  ATTGCGGATA TGAGGCTCAG CGTGAATCCG CCCCGCTGGC ACTACGTTCT GCTGCTACGA GGCATCCTGC TGCTGTTGTG GTTTGCGGTG GCTCTCACAA ACGCAGTCCT CTGTAGCCTG  CTTATCGTGG AGTACTTTCT GGCTTCCAAC GATCGCATGG CGAGCATCAG CAAGTCAAGC GAATGGCTCT TCGTGATGGT TGTGACCCCA GTGCACATTA CGATTTTCGT GCTTCTGCTT  TTCTTCTTCT TTCTACCGCG TTCATGGACC TGGCGCACGA CGGTAACAGC GAAAGTTTTC CGTCGTTGCT TGCAAGGCTC CTGGGACCAC CAGCAGCGTT CCAATAAAGT TGTGAGCGAC  GCTCGCAACG CGGAATGGAA CGCTTTCTCT CACATTCGCA CCGTAACGTT CGTCTGGGTA GTGCGCTACG TCGAAGACCT CTGGTTTCTC GAAAAGCTCT ATGAACTCGC TTCTCAGCAG  GATGCCAGTG ATCCGTGTCG ACCACGGTTA CGAATTCATG TTCATATTAC CCGACTTGGA CACGACGACG CCGATCCGGT AAGCAGCAGA CTCCCGGCGA ATTGCGGCGA GATTCTCCAG  TTCCATTGTG GTCGACCCGA CTTTGGCGAA TACGTCGCGG AATTGGTGAA CGAGGACCAC GACACCACGA CACCGCTAGC CGGACGCGGG AAACCGGGCG CACCTGCAAG CATCAGACGC  TTCCAACGCA CGCGAGCCTT CTCGAACAAA GTGCATCATG GCATCTTCTT TTGCGGCGGC AGGTCTGTTG TCCGCAGCGT GCACCAGAGC ATTCGTGCGG TAGCAGCGGC ACGGGCGGCT 
CGAGGTTTGC CTCAACGCAA TGTGTTCTTC ATGAAGGAGA ACTTTTAA 

Retrieve as FASTA