Entry information : EhuxAPx-CcP03 ( APTP-2012496)
Entry ID 13365
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-10 (Achraf Jemmat)
Peroxidase information: EhuxAPx-CcP03 ( APTP-2012496)
Name (synonym) EhuxAPx-CcP03 ( APTP-2012496)
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Noelaerhabdaceae Emiliania
Organism Emiliania huxleyi    [TaxId: 2903 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EhuxAPx-CcP03
start..stop
S start..stop
TpsAPx-CcP01 352 2e-123 21..289 2..265
OCgrAPx-CcP03 347 2e-121 30..280 1..249
OCgrCcP05 322 3e-112 40..280 1..239
SymAPx-CcP1_F1 273 9e-91 25..278 133..380
Literature and cross-references EhuxAPx-CcP03 ( APTP-2012496)
Literature Read,B. et al., CONSRTM DOE Joint Genome Institute. Genome variability drives Emilianias global distribution. Unpublished
Protein ref. GenBank:   XP_005784409.1
DNA ref. GenBank:   NW_005200881.1 (35294..36609) JGI genome:   scaffold_17 (35368..36249)
mRNA ref. GenBank:   XM_005784352.1
EST ref. GenBank:   GE144774.1 [5' end]   FP185284.1 [3' end]
Cluster/Prediction ref. JGI gene:   434150
Protein sequence: EhuxAPx-CcP03 ( APTP-2012496)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   294
PWM (Da):   %s   31192.66  
PI (pH):   %s   4.67
Sequence
Send to BLAST
Send to Peroxiscan
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MAHAYTVPAA GDISKAGDGK SLLEHIVADV KALLAAKNCG PILIRLSWHD AGVFSNGSLK GGCPNAVMRF TDSGEGTFEA NAGLTDVAIG LLKPIADKYV TAGVISNADL WALAANVAIE  FMGGPHVVTR FGRPDAKDSG ESVESQVGRL PDGDKGVSHL REVFAPKGFD DRDIVALSGG HTVGGCKQQR SGFDGLWTEA PLVFDNSYFT DLLEKTYRPE TVEATGCPQH RSDKGTIMLI 
SDLALLEDAA FKSVVEEYAA DQSRFFADFV SAWTRLQENG VGDLLRDELA PPK* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 16 ESTs.
DNA
Send to BLAST
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ATGGCTCACG CCTACACAGT CCCAGCTGCT GGCGACATCA GCAAAGCCGG CGACGGGAAG TCGCTGCTCG AGCACATCGT GGCGGATGTC AAAGCGCTCC TCGCCGCCAA AAACTGTGGT  CCGATTCTCA TCCGGCTATC GTGGCACGAT GCAGGCGTGT TTTCAAACGG CAGCCTCAAG GGTGGCTGTC CGAACGCAGT GATGCGCTTC ACCGACTCCG GCGAAGGCAC CTTCGAAGCA  AACGCAGGGC TGACCGACGT GGCGATCGGC CTGCTCAAGC CGATCGCCGA CAAGTACGTG ACTGCGGGCG TGATCTCAAA CGCCGACTTG TGGGCGCTGG CCGCGAACGT GGCGATCGAG  TTTATGGGAG GCCCCCACGT CGTCACCCGT TTTGGCCGCC CCGACGCCAA GGACTCTGGT GAGTCGGTCG AGTCGCAAGT TGGGAGGCTG CCTGATGGCG ACAAGGGCGT GTCGCACCTT  CGGGAGGTGT TTGCGCCGAA GGGGTTCGAC GACCGTGACA TTGTCGCGCT TTCCGGCGGG CACACGGTAG GCGGCTGCAA GCAGCAGCGC TCCGGCTTCG ACGGCCTCTG GACTGAGGCT  CCGCTCGTGT TTGACAACTC GTACTTCACC GACCTGCTCG AGAAGACCTA CCGGCCCGAG ACGGTGGAGG CGACCGGCTG CCCGCAGCAC CGGTCGGACA AGGGCACCAT CATGCTCATC  TCCGACCTGG CGCTGCTCGA GGACGCGGCC TTCAAGTCGG TCGTCGAAGA GTACGCCGCG GACCAGAGCC GGTTCTTCGC CGACTTTGTG TCCGCTTGGA CCAGGCTCCA AGAGAACGGC 
GTGGGCGACC TGCTCCGCGA CGAGCTGGCA CCGCCGAAGT AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCACG CCTACACAGT CCCAGCTGCT GGCGACATCA GCAAAGCCGG CGACGGGAAG TCGCTGCTCG AGCACATCGT GGCGGATGTC AAAGCGCTCC TCGCCGCCAA AAACTGTGGT  CCGATTCTCA TCCGGCTATC GTGGCACGAT GCAGGCGTGT TTTCAAACGG CAGCCTCAAG GGTGGCTGTC CGAACGCAGT GATGCGCTTC ACCGACTCCG GCGAAGGCAC CTTCGAAGCA  AACGCAGGGC TGACCGACGT GGCGATCGGC CTGCTCAAGC CGATCGCCGA CAAGTACGTG ACTGCGGGCG TGATCTCAAA CGCCGACTTG TGGGCGCTGG CCGCGAACGT GGCGATCGAG  TTTATGGGAG GCCCCCACGT CGTCACCCGT TTTGGCCGCC CCGACGCCAA GGACTCTGGT GAGTCGGTCG AGTCGCAAGT TGGGAGGCTG CCTGATGGCG ACAAGGGCGT GTCGCACCTT  CGGGAGGTGT TTGCGCCGAA GGGGTTCGAC GACCGTGACA TTGTCGCGCT TTCCGGCGGG CACACGGTAG GCGGCTGCAA GCAGCAGCGC TCCGGCTTCG ACGGCCTCTG GACTGAGGCT  CCGCTCGTGT TTGACAACTC GTACTTCACC GACCTGCTCG AGAAGACCTA CCGGCCCGAG ACGGTGGAGG CGACCGGCTG CCCGCAGCAC CGGTCGGACA AGGGCACCAT CATGCTCATC  TCCGACCTGG CGCTGCTCGA GGACGCGGCC TTCAAGTCGG TCGTCGAAGA GTACGCCGCG GACCAGAGCC GGTTCTTCGC CGACTTTGTG TCCGCTTGGA CCAGGCTCCA AGAGAACGGC 
GTGGGCGACC TGCTCCGCGA CGAGCTGGCA CCGCCGAAGT AG 

Retrieve as FASTA