Entry information : HaPrx[P]81 (HannXRQChr10g0316261)
Entry ID 13635
Creation 2016-05-02 (Christophe Dunand)
Last sequence changes 2017-11-28 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-11-29 (Christophe Dunand)
Peroxidase information: HaPrx[P]81 (HannXRQChr10g0316261)
Name (synonym) HaPrx[P]81 (HannXRQChr10g0316261)
Class Class III peroxidase     [Orthogroup: Prx032]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx[P]81
start..stop
S start..stop
HaPrx[P]55 361 2e-130 1..177 1..179
HaPrx[P]104 361 2e-130 1..177 1..179
LsPrx07 204 1e-66 1..133 152..285
LperPrx07 190 1e-61 1..121 152..271
Literature and cross-references HaPrx[P]81 (HannXRQChr10g0316261)
DNA ref. HanXRQ genome:   HanXRQChr10 (234956952..234957687)
Protein sequence: HaPrx[P]81 (HannXRQChr10g0316261)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   177
PWM (Da):   %s   19633.77  
PI (pH):   %s   8.31
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
PGFLGRRDGL PSNAAWIEFA xPSFSWESSL AYFESKGLDV QDMVTLLGAH MMRRVRCINI HDCLYNFNNT RKPDPTIEES TLSYLRNGCP PKTRLGQPNP LINLNPSNLD QLFTNSYYSQ 
VLTNKVVGVT RMLSDEYASP IPDFKLQFTF SMAGMGGLKV ITGTDGQIRL NCRMVNK 

Retrieve as FASTA  
Remarks Pseudogene from genomic (exon 1 and 2 are missing, several frame shift). join(234956952..234957092,234957268..234957506,234957535..234957687)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTGGTTTCT TAGGAAGAAG AGACGGACTT CCATCGAACG CAGCATGGAT CGAATTCGCT TAnCCATCCT TTTCGTGGGA ATCATCTTTG GCATACTTTG AATCTAAAGG TTTAGATGTG  CAAGACATGG TTACACTCTT AGGTAAGTCA TCTATTCTAA CAATATTGTT CCTATATTTA TAACACACTG ATAATTACTT GCAAGTCAAG CATGCTGATA TTATGATCAC GAAAGACCAA  ACTCTAAATA TTGCCAGAAC CGCACTCTTT AGTCACACAT TTTTTTATAA GTTCTCAATA AAATTTATAA CTTTTAGGAG CACATATGAT GAGAAGAGTT CGATGCATTA ACATTCATGA  TTGCCTATAC AACTTCAACA ACACTAGAAA ACCCGACCCC ACAATAGAAG AATCTACATT GAGTTACTTA AGGAACGGAT GCCCTCCAAA AACGAGGTTG GGTCAACCTA ACCCGCTCAT  AAACTTAAAC CCGAGCAACC TGGACCAGCT CTTTACCAAC TCCTACTACT CGCAAGTGTT GACCAATAAA GTTGTTTTAG GCGTCGACCA ACAGCTTCGC TATGGGGGTG ACACGTATGT  TAAGCGATGA ATATGCTTCG CCGATTCCAG ATTTTAAGCT GCAGTTTACT TTTTCAATGG CTGGGATGGG TGGGCTTAAG GTTATAACTG GAACTGATGG TCAGATCCGA CTCAACTGTC 
GAATGGTTAA CAAGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTGGTTTCT TAGGAAGAAG AGACGGACTT CCATCGAACG CAGCATGGAT CGAATTCGCT TAnCCATCCT TTTCGTGGGA ATCATCTTTG GCATACTTTG AATCTAAAGG TTTAGATGTG  CAAGACATGG TTACACTCTT AGGAGCACAT ATGATGAGAA GAGTTCGATG CATTAACATT CATGATTGCC TATACAACTT CAACAACACT AGAAAACCCG ACCCCACAAT AGAAGAATCT  ACATTGAGTT ACTTAAGGAA CGGATGCCCT CCAAAAACGA GGTTGGGTCA ACCTAACCCG CTCATAAACT TAAACCCGAG CAACCTGGAC CAGCTCTTTA CCAACTCCTA CTACTCGCAA  GTGTTGACCA ATAAAGTTGT TGGGGTGACA CGTATGTTAA GCGATGAATA TGCTTCGCCG ATTCCAGATT TTAAGCTGCA GTTTACTTTT TCAATGGCTG GGATGGGTGG GCTTAAGGTT 
ATAACTGGAA CTGATGGTCA GATCCGACTC AACTGTCGAA TGGTTAACAA GTAG 

Retrieve as FASTA