Entry information : HaGPx05 (HanXRQChr07g0189821)
Entry ID 13677
Creation 2016-05-11 (Christophe Dunand)
Last sequence changes 2016-05-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGPx05 (HanXRQChr07g0189821)
Name (synonym) HaGPx05 (HanXRQChr07g0189821)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGPx05
start..stop
S start..stop
StGPx08 275 4e-96 1..157 1..161
LeGPx08 274 9e-96 1..157 1..161
VvGPx08 274 1e-95 5..156 9..160
NtGPx08-1A 273 1e-95 1..157 1..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24582211..24582252 42 N° 2 24582763..24582839 77 N° 3 24582961..24583022 62 N° 4 24583116..24583234 119
N° 5 24583366..24583533 168 N° 6 24583626..24583742 117  
join(24582211..24582252,24582763..24582839,24582961..24583022,24583116..24583234 ,24583366..24583533,24583626..24583742)


exon

Literature and cross-references HaGPx05 (HanXRQChr07g0189821)
DNA ref. HanXRQ genome:   HanXRQChr07 (24582211..24583742)
Cluster/Prediction ref. HanXRQ:   HanXRQChr07g0189821
Protein sequence: HaGPx05 (HanXRQChr07g0189821)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   195
PWM (Da):   %s   21528.06  
PI (pH):   %s   5.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MANQPESIYDLTVKDANGVNVDLSIYKGKVLLVVNVASKCGLTNSNYSELNQLYAKYKAGLEILAFPCNQFGDEEPGSNKQILEFVCTRFKSEFPVFDIEVNGENAAPIYKFLKSGKRGIFGDDIQWNFAKFLVGRDGQAVGRYYPTTSPLTIERCAETCGIDSRQGPLVIRLTRSDQNALDLILVLKDLGLH

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAAACCAACCTGAATCCATCTATGATCTTACAGTCAAGGTAAACTACTTATACAACCCCAACACACACACACACACACACATGTTTTGTGACCATTAGTCTTTATCATCAACAACA
AACTTGTGTTTTGATTAGGGTTATCTTTAATCTTTTGATTAAGAAACACAAGCAAGCAGACATTGATTTTTCAACTTTTTAATGTTTAAAGATCCATACCCATTAATAAATGATTGATCT
TGGTGGTATTTTAGCTTTCAACAAATCTTGAATCTGGGTTTTGAAGCTCCCAGTTTGACTTTTGAAGTCAACTAGGTTGAATATTAAACTGAAATTAGTTAGTCAACGCTTTTAATCTTC
AAGAAAATGTGGTAACCTGATATAGTGATATAGAATATGACATAGACTAAATGCAGAAGAATTTACAACAAAAACATTACATATTTGCATTTCAAAGGTAACAAGTTTGACCCAGAAAGT
CAACTTTGAAATCCTCACTCAACTTGTTGTACAATTGATTGTCATATTGCTGGTTCTCTTCTCTATATGCAGGATGCTAATGGAGTCAATGTTGACCTTAGCATCTACAAAGGAAAAGTT
TTACTTGTAGTCAATGTTGCCTCCAAATG
GTAATGATTCTTTTTCTGTTCTTCGGTTTTTCTGCTACTTGTGTATAATCATAATGCAGTTTTCCCAATTGGGTATAACTTGTTTAAATCT
TGTTTATGCAATGGTGAATCTTTGTGTCAGCGGGTTGACGAATTCGAATTACTCCGAGTTGAATCAACTCTATGCAAAATACAAAGCTCAAGGTTCGGTTTTTGAATGATAGCTTGTTAT
AAGGATATGAATTTCAAGAATTTGATGCATGATTTGTATGTTTGACTATTAATGAGACTATGTAGGTTTGGAAATCTTGGCATTTCCGTGTAATCAATTTGGGGATGAGGAGCCCGGGAG
TAACAAGCAGATTTTAGAGTTTGTTTGTACTCGATTCAAATCCGAATTCCCTGTTTTCGACAAG
GTAAATCGGTTTTTTTGAATCATACTATCAGTTATTTAACAAAAAATTCTGTGAAC
TAAACGTCCCTTATTCATATACGAATATATCTTGATGCAATTTATGTTTGTTTATGCACATGCAATGATTGTTAGATTGAAGTGAATGGCGAAAACGCTGCACCAATATACAAGTTCTTG
AAGTCGGGAAAAAGAGGTATCTTCGGGGACGACATTCAATGGAACTTTGCAAAATTTTTGGTTGGTAGAGACGGGCAGGCTGTTGGACGTTATTACCCGACAACTTCACCTCTCACAATC
GAG
GTAAAAGCAACCTCGTTTTATAAAAATCATTCTAAAACGAGTGTATATTTGTTATGGTGTATTTCTCTTAAAGCTATGATCATTTTGCAGAGAGATGTGCAGAAACTTGTGGAATAG
ATTCACGACAAGGTCCTCTCGTCATAAGATTAACGCGCAGCGATCAAAATGCTTTAGATTTGATTTTGGTTTTAAAAGACTTGGGGCTTCAT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAAACCAACCTGAATCCATCTATGATCTTACAGTCAAGGATGCTAATGGAGTCAATGTTGACCTTAGCATCTACAAAGGAAAAGTTTTACTTGTAGTCAATGTTGCCTCCAAATGC
GGGTTGACGAATTCGAATTACTCCGAGTTGAATCAACTCTATGCAAAATACAAAGCTCAAG
GTTTGGAAATCTTGGCATTTCCGTGTAATCAATTTGGGGATGAGGAGCCCGGGAGTAAC
AAGCAGATTTTAGAGTTTGTTTGTACTCGATTCAAATCCGAATTCCCTGTTTTCGACAAG
ATTGAAGTGAATGGCGAAAACGCTGCACCAATATACAAGTTCTTGAAGTCGGGAAAAAGA
GGTATCTTCGGGGACGACATTCAATGGAACTTTGCAAAATTTTTGGTTGGTAGAGACGGGCAGGCTGTTGGACGTTATTACCCGACAACTTCACCTCTCACAATCGAG
AGATGTGCAGAA
ACTTGTGGAATAGATTCACGACAAGGTCCTCTCGTCATAAGATTAACGCGCAGCGATCAAAATGCTTTAGATTTGATTTTGGTTTTAAAAGACTTGGGGCTTCAT

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAAACACAAA GAGGTCAAAT TCATGCTTCA TACGTTGGCA AAAATCGTCA CAGTTTTCAG CTCCAAATTT CAGCCAATCA GCCATGGCAA ACCAACCTGA ATCCATCTAT GATCTTACAG  TCAAGGATGC TAATGGAGTC AATGTTGACC TTAGCATCTA CAAAGGAAAA GTTTTACTTG TAGTCAATGT TGCCTCCAAA TGCGGGTTGA CGAATTCGAA TTACTCCGAG TTGAATCAAC  TCTATGCAAA ATACAAAGCT CAAGGTTTGG AAATCTTGGC ATTTCCGTGT AATCAATTTG GGGATGAGGA GCCCGGGAGT AACAAGCAGA TTTTAGAGTT TGTTTGTACT CGATTCAAAT  CCGAATTCCC TGTTTTCGAC AAGATTGAAG TGAATGGCGA AAACGCTGCA CCAATATACA AGTTCTTGAA GTCGGGAAAA AGAGGTATCT TCGGGGACGA CATTCAATGG AACTTTGCAA  AATTTTTGGT TGGTAGAGAC GGGCAGGCTG TTGGACGTTA TTACCCGACA ACTTCACCTC TCACAATCGA GAGATGTGCA GAAACTTGTG GAATAGATTC ACGACAAGGT CCTCTCGTCA  TAAGATTAAC GCGCAGCGAT CAAAATGCTT TAGATTTGAT TTTGGTTTTA AAAGACTTGG GGCTTCATTA AAGAACATGG TATTCATCAA GTTAGGAGGC CTGAGATATT CTCCTACTGC  TACTTAACCA GGGGTGTAAA TTTCTAACAT CAACACAAGC CTAACGCGAA ATTTACACTG TTAGTTTTTG TCTAAACGGG TCCGGGTCAG TTTTAGGTAG AACTCGTAAA CACGCTTAAC 
TAAACCACCA AAACGGCTTG TGTTTGAGTC AACTCTGGTC GAACCCGCAA ACACGTTTAG CTAAATCACC TAAACAACTT GTGTTTGGGT AAACATTACG GGTAAACGGG TT 

Retrieve as FASTA