Entry information : Cs1CysPrx ( orange1.1g044272m)
Entry ID 1369
Creation 2007-09-12 (Christophe Dunand)
Last sequence changes 2015-10-13 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-04 (Achraf Jemmat)
Peroxidase information: Cs1CysPrx ( orange1.1g044272m)
Name (synonym) Cs1CysPrx ( orange1.1g044272m)
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type Callus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Cs1CysPrx
start..stop
S start..stop
Ccl1CysPrx01 410 2e-148 1..211 1..204
Vv1CysPrx 382 3e-137 1..219 1..219
Egu1CysPrx03 373 1e-133 1..219 1..219
Egr1CysPrx03 373 1e-133 1..219 1..219
Literature and cross-references Cs1CysPrx ( orange1.1g044272m)
Literature Close,T.J et al., Development of EST Resources and New Genetic Markers for California Citrus - Washington Navel Orange Callus. UCRCS08-2. Unpublished
Protein ref. GenBank:   XP_006488766.1 [Incorrect prediction]
DNA ref. GenBank:   NC_023054.1 [Incorrect splicing]
mRNA ref. GenBank:   XM_006488703.1 [Incorrect prediction]
EST ref. GenBank:   CX070321.1
Protein sequence: Cs1CysPrx ( orange1.1g044272m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   219
PWM (Da):   %s   24265.28  
PI (pH):   %s   5.95
Sequence
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Send to Peroxiscan
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MPGLTIGDSV PNLQVQTNQG NFKLHDFIGD NWTIIFSHPG DFTPVCTTEL GKMAAYVPEF DKREVKLLGL SCDDVKSHNE WIKDIEAYTP GCKVSYPIIA DPNREIIKQL NMVDPDEKDS 
SGKQLPSRAL HIVGPDHQVK LSFLYPASTG RNMDEVVRAL DSLQKALKHK VATPANWKQG DPVVISPSVS SDQAKETFPQ GFETVDLPSK KEYLRFTNV 

Retrieve as FASTA  
Remarks Complete sequence from 38 ESTs and DNA. Incorrect prediction from Phytozome (partial and misplicing) .
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCTGGCC TCACAATTGG AGATTCTGTT CCCAACCTTC AAGTCCAAAC CAATCAAGGA AACTTTAAGC TTCATGACTT CATCGGTGAT AACTGGACCA TTATCTTCTC TCACCCAGGT  TCCCACTTTT GTCTCTGATC ATCTTACTAC TACTTTTTTT TTATTTGATA TATGATGATC ACTAATGTTC TTATGATGTG CTTGCATGTA GGTGATTTCA CTCCTGTGTG CACAACTGAA  CTTGGCAAGA TGGCTGCTTA TGTTCCAGAG TTTGATAAGA GAGAAGTGAA GCTTCTGGGT TTGTCCTGTG ATGACGTTAA GTCACACAAT GAGTGGATCA AAGACATTGA AGCCTACACC  GTGAGCTTTT CTTTGTGATT CTTGTTTGGT CAGACGTGTG GTCAATTGGT CAAATGTTGA CTTTTATTTT TGTGATTAAA CCACGTGTTG GTTTGCGTGC AGCCTGGTTG CAAGGTCTCA  TAGCCGATCA TCGCAGATCC CAATCGAGAG ATCATCAAGC AACTCAACAT GGTGGACCCG GATGAAAAAG ATTCATCAGG AAAGCAGCTC CCTTCTCGAG CCCTTCATAT CGTGGGCCCT  GATCATCAGG TGAAACTGAG CTTTCTTTAC CCGGCGTCGA CTGGCCGGAA CATGGATGAA GTAGTAAGGG CATTGGACTC TCTGCAGAAG GCACTGAAGC ATAAGGTTGC AACGCCTGCA  AACTGGAAGC AGGGAGATCC GGTGGTGATA TCACCAAGTG TGTCTAGTGA TCAAGCCAAA GAGACGTTCC CTCAAGGTTT TGAGACTGTG GATCTTCCAT CCAAGAAAGA GTACTTGCGT 
TTCACCAATG TCTAA 

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CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCTGGCC TCACAATTGG AGATTCTGTT CCCAACCTTC AAGTCCAAAC CAATCAAGGA AACTTTAAGC TTCATGACTT CATCGGTGAT AACTGGACCA TTATCTTCTC TCACCCAGGT  GATTTCACTC CTGTGTGCAC AACTGAACTT GGCAAGATGG CTGCTTATGT TCCAGAGTTT GATAAGAGAG AAGTGAAGCT TCTGGGTTTG TCCTGTGATG ACGTTAAGTC ACACAATGAG  TGGATCAAAG ACATTGAAGC CTACACACCT GGTTGCAAGG TCTCATATCC AATCATCGCA GATCCCAATC GAGAGATCAT CAAGCAACTC AACATGGTGG ACCCGGATGA AAAAGATTCA  TCAGGAAAGC AGCTCCCTTC TCGAGCCCTT CATATCGTGG GCCCTGATCA TCAGGTGAAA CTGAGCTTTC TTTACCCGGC GTCGACTGGC CGGAACATGG ATGAAGTAGT AAGGGCATTG  GACTCTCTGC AGAAGGCACT GAAGCATAAG GTTGCAACGC CTGCAAACTG GAAGCAGGGA GATCCGGTGG TGATATCACC AAGTGTGTCT AGTGATCAAG CCAAAGAGAC GTTCCCTCAA 
GGTTTTGAGA CTGTGGATCT TCCATCCAAG AAAGAGTACT TGCGTTTCAC CAATGTCTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCTCTTTGCT TTCAAAATGC CTGGCCTCAC AATTGGAGAT TCTGTTCCCA ACCTTCAAGT CCAAACCAAT CAAGGAAACT TTAAGCTTCA TGACTTCATC GGTGATAACT GGACCATTAT  CTTCTCTCAC CCAGGTGATT TCACTCCTGT GTGCACAACT GAACTTGGCA AGATGGCTGC TTATGTTCCA GAGTTTGATA AGAGAGAAGT GAAGCTTCTG GGTTTGTCCT GTGATGACGT  TAAGTCACAC AATGAGTGGA TCAAAGACAT TGAAGCCTAC ACACCTGGTT GCAAGGTCTC ATATCCAATC ATCGCAGATC CCAATCGAGA GATCATCAAG CAACTCAACA TGGTGGACCC  GGATGAAAAA GATTCATCAG GAAAGCAGCT CCCTTCTCGA GCCCTTCATA TCGTGGGCCC TGATCATCAG GTGAAACTGA GCTTTCTTTA CCCGGCGTCG ACTGGCCGGA ACATGGATGA  AGTAGTAAGG GCATTGGACT CTCTGCAGAA GGCACTGAAG CATAAGGTTG CAACGCCTGC AAACTGGAAG CAGGGAGATC CGGTGGTGAT ATCACCAAGT GTGTCTAGTG ATCAAGCCAA  AGAGACGTTC CCTCAAGGTT TTGAGACTGT GGATCTTCCA TCCAAGAAAG AGTACTTGCG TTTCACCAAT GTCTAAAGCT TCACCAGTTT CCATTTAGCT AAGCAATAGA TAAATAGTTG 
ACCATGCATG TTATATACGT TCGTTGATAT ATTATACAAT ACATGCAAGC GCAAAAAAAA AG 

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