Entry information : AtCSD03 (AT5G18100/CSD3)
Entry ID 13737
Creation 2016-05-24 (Christophe Dunand)
Last sequence changes 2016-05-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: AtCSD03 (AT5G18100/CSD3)
Name (synonym) AtCSD03 (AT5G18100/CSD3)
Class Cu/Zn SOD    [Orthogroup: CSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtCSD03
start..stop
S start..stop
ThasCSD03 278 8e-98 6..164 7..165
LeCSD02 231 3e-79 6..159 2..155
HaCSD03 230 5e-79 6..159 2..156
AtrCSD01 230 7e-79 1..159 1..157
Literature and cross-references AtCSD03 (AT5G18100/CSD3)
Omic ref. AtProteome:   At5g18100 ATTED-II:   At5g18100 e-FP Browser:   At5g18100 ePlant:   At5g18100 TAIR:   At5g18100
Protein sequence: AtCSD03 (AT5G18100/CSD3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165
PWM (Da):   %s   16930.62  
PI (pH):   %s   7.73
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEAPRGNLRA VALIAGDNNV RGCLQFVQDI SGTTHVTGKI SGLSPGFHGF HIHSFGDTTN GCISTGPHFN PLNRVHGPPN EEERHAGDLG NILAGSNGVA EILIKDKHIP LSGQYSILGR 
AVVVHADPDD LGKGGHKLSK STGNAGSRVG CGIIGLQSSA DAKL* 

Retrieve as FASTA  
Remarks
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGCTC CTAGAGGAAA TCTGAGAGCG GTGGCTCTTA TCGCCGGCGA TAACAACGTC CGAGGCTGTC TTCAATTCGT ACAAGACATT TCCGGTCTTT CTGCGTCGAC ATTTTTAATC  TCTGAGGACT TGTTTGATAT CTCACTCATT GAGCTCTGGT CTGTGGTCTT TGTGTGTTTT TGTTTACAGG AACTACTCAT GTCACCGGGA AGATCTCAGG ACTCTCTCCT GGCTTCCATG  GATTTCATAT TCACTCTTTT GGTGATACCA CAAATGGCTG CATCTCTACT GGTTTGTTTG TTATCAATTT TAGTTCTGCT GAGTTTGAAT TACTTTCAGA TGGATTGTTT TTTTTTGGTA  GCTTGTGCTA CTTACAAGTC TTGACTGTTT CTCTTAAATA ACCTTTATCT AAAAGACTGA TACACATACA GACATGTGAA TCTTGATGAC ACTGGATTGG TTTGGATCAT AATTTTAGTT  TAGGATGGCT ATTGGTGTTG CCAAAGAATT GGCTAAAGGA ACCATTTGGA TAGCTGATAA TGGAATCAGA AACAAAGCTT AAAAATCTCA GCTAATGAAT GTTTGCTTTT ACTGGTTTTG  TTCTCCTTTG TGATATATAC CTGAGTTTTC ATGAAAATGG TAACTTTCAG GACCTCACTT CAATCCATTA AATCGAGTTC ACGGGCCACC GAACGAGGAA GAGCGTCATG CTGGCGATTT  GGGTAACATT CTTGCAGGAT CAAACGGTAT ATAATGTTTT TCTCACCTCT ATATATGGTT TTGTGTCCTT TGAAGAATGA TGCTAGTAAT TTTTGGATGT GCCTTGTTTT CAGGTGTTGC  TGAAATCTTA ATCAAAGACA AACATGTATA TGATCTTCTT TTTTCACTTC TTCAATCATT TAATGTTTGG CAAAATAAAC ATTACATTTT TCGGTTCTTA GATTGTTCAT ATATCTCTCG  GACGTTTCAC CATTTATCTC ATCTTGTCTT TGAATTCACA GATACCGCTT AGTGGGCAGT ATTCCATACT CGGGAGGGCG GTTGTTGTGC ATGCGGATCC TGATGACCTT GGGAAAGGTA  GAAACTTCTT TTAGCCTTTG GATATCCATA TGGTCCAATG TCACAATATG CAAATTGAGT TGTCGAAGTT TAAGAGTAAT ATCACAAAAG CAATCACTGT AGTTTCATGT AGTTGTCATC  AGGTACCAAG CATTAGTTCT TAGATTCGTG ATGTGCTTTA TCGATGTTAA AGAGCGATGA TCTCTTTGCG ATGTTACTGT GCAGGAGGGC ACAAGCTTAG CAAATCAACT GGAAACGCAG  GCTCGAGAGT TGGATGTGGT AATGCTTACA AGGCTAAGAT TTCTAAAAAA CAGAACACCG TTTTCTCTTA TTTTCTAGTT TCCATTGTGT GAAGTAATTC ACTCGAGGCT TTGATGTTGA 
ACCAGGTATC ATCGGACTTC AATCATCTGC GGATGCTAAA CTATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGCTC CTAGAGGAAA TCTGAGAGCG GTGGCTCTTA TCGCCGGCGA TAACAACGTC CGAGGCTGTC TTCAATTCGT ACAAGACATT TCCGGAACTA CTCATGTCAC CGGGAAGATC  TCAGGACTCT CTCCTGGCTT CCATGGATTT CATATTCACT CTTTTGGTGA TACCACAAAT GGCTGCATCT CTACTGGACC TCACTTCAAT CCATTAAATC GAGTTCACGG GCCACCGAAC  GAGGAAGAGC GTCATGCTGG CGATTTGGGT AACATTCTTG CAGGATCAAA CGGTGTTGCT GAAATCTTAA TCAAAGACAA ACATATACCG CTTAGTGGGC AGTATTCCAT ACTCGGGAGG  GCGGTTGTTG TGCATGCGGA TCCTGATGAC CTTGGGAAAG GAGGGCACAA GCTTAGCAAA TCAACTGGAA ACGCAGGCTC GAGAGTTGGA TGTGGTATCA TCGGACTTCA ATCATCTGCG 
GATGCTAAAC TATAG 

Retrieve as FASTA