Entry information : CsPrx15 (orange1.1g020615m/Cs2g09310)
Entry ID 1376
Creation 2007-09-27 (Christophe Dunand)
Last sequence changes 2011-07-02 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx15 (orange1.1g020615m/Cs2g09310)
Name (synonym) CsPrx15 (orange1.1g020615m/Cs2g09310)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue types Shoot meristems
Whole seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx15
start..stop
S start..stop
CclPrx07 662 0 1..323 1..323
MePrx83 519 0 8..323 1..316
PpePrx20 512 0 6..323 7..325
PtPrx41 511 0 4..323 6..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14484..14702 219 N° 2 13493..13684 192 N° 3 13142..13310 169 N° 4 12209..12600 392
complement(join(12209..12600,13142..13310,13493..13684,14484..14702))


exon

Literature and cross-references CsPrx15 (orange1.1g020615m/Cs2g09310)
Literature Bausher,M., et al., An expressed sequence tag (EST) set from Citrus sinensis L. Osbeck whole seedlings and the implications of further perennial source investigations Plant Sci. 165, 415-422 (2003).
DNA ref. Citrus sinensis Annotation Project:   chr2 (6628218..6631077) Phytozome 11:   scaffold00743 (14702..12209)
EST ref. GenBank:   CF835865 [5' end]
Protein sequence: CsPrx15 (orange1.1g020615m/Cs2g09310)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (297)
PWM (Da):   %s   34580.54 (31774.1)  
PI (pH):   %s   10.03 (9.93) Peptide Signal:   %s   cut: 27 range:27-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 3 ESTs (CK665074, CK936454). Cultivar ="Ridge Pineapple".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTTTTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAACTTGTCCAAAATTG
TTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTTCAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGACTGTTTCGTCAAC
GTAATTTTACTTCTCTTTTTC
TCTACACGACAACATTATTCATTCAAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTATTAAGTAGTGGTCTATGNNNNNNNNNNNN
NNNNNNNNNTGTGTCTCTCTTAGAATTGGATTGGAACTCGAATGGTCTACCAACAGAATATGCTTGAAAACCACTCAATATAAATCACGTTATATTGATCACATTCCTCATAACAAATCA
GAATCTTTTGTTTTTAAAAAATTATTGACTTTTAGTTTTTTAATATTTTACTATTTTACCTTTGATGTTATAAACCAATCCATTAACCACATAAAAATTTTTGGGGGTAAAATAATGAAA
GACACAAATAAAAGTTGAAAGTTAACAATTTAGCTTTGATAATTTATGAAACATGAAGGGAAAATGATATATTTATTAGCAAATAACAGGAGGTTATGATCATTTTACTCTCATTAACTC
AGAAAATTAATATCCAAAAGTTTTAAATAACCATGTTGCAATAAATGCACATATATTAATCAAACCTAGATTGAAGTAAATGAGATTCAAACCCCAGATCTCTTTTACCATTCCTAAAGG
TTTTACATCCAACCAACTGTACAATGCACACTAATAAATTGGTGTTTATCAAAGTTGCTTACTACAAATTTTCAACTTCAATACATATGTGTTTCTTTTTTCGGCTTCATAGTATTGATC
CATATATGTGCTGTGATTAAATTAACTGTGTCGGTAAATGTTTCAATATATATTACAGGGGTGTGATGGATCAATTCTACTAGATGACACGTCATCTTTCACTGGTGAGAAGACTTCAGG
ACCAAATATCAATTCAGCAAGAGGATTTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGAGTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTC
AGTTGCAATT
GTATGTTCTCTTCTCCACACAACAAAAGCCATTATTACGTCCTAATAACTTATACAGACTACCAGTCAAATAAAACTGTTTAAAAATCACTTGGTGAATCTACTGGTGGC
AATGTTTAATTAACCATTGAAACTGAATTAATGTTATTGATATATGATGTATTTATTATTGTATATATGCAGCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCAAA
ACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACCTCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGCCAAGGACATGGTTGCTTTATCC
G
GTAAACTTTCAACCCCTTCCAATCTTAGTGAGAGCAACATCCATACTTCAAACCCCAAAAAGGCTTATTAACCAAACAAAAAATTGATCAAAATCTTCTTACTCCTTTCAAAATTAACA
ATTTCTCCTCATGATCAAAACCCATCAAAACCACTCATCATTAAAAAGAATTTGCTAATAACTTCCAATTTTTCTTTCTCTTTTACAATTTTACCCCTAGAATCATATTAATGATTTTTT
TAATTGATCAATAGGTGGCTTCTACATGCACAAAGTCAACAATTAATCAATAAAAAAATTAATCATCAATCTAATTATTAGTAAAATAGTAAAAGACACAAAATATGTTGAAAGTTCACA
AAATCTTTTTTTAACAATAGAAGTGTTTGGATGAATTCTCGAGTATGAAAGATAAAATAATTTATTACTAAAGCTACCAAACCCTACTAGGACTTATAATTTCAGTGTATTTGGTGTGTA
GAAAACTCAAGCTAATAATGGATGAATTTCATAATTGATTTCATTTTGATTATATTACACAGGAGCGCATACAATTGGGCAAGCAAGGTGTGTAGCCTTCAGAAATCGCATATACAATGA
AAGCAACATTGAAAGTTCATTTGCAAAGAATAGGCGAGGGAACTGCCCAAGGGCCACAGGATCAGGAGATAATAATCTAGCTCCATTGGATTTTCAAAGTCCAAATAAATTTGACAACCA
GTACTACAAGCACCTCTTAAACCAAAAGGGCTTACTTCACTCTGATCAAATCTTATTCAATGGAGGATCCACTGATTCTTTGGTCAGTACATATGCCAGTAACTCTAAAACTTTCAATTC
TGATTTTGCTGCTGCAATGATCAAGATGGGAGATATCAGTCCACTCACCGGATCCATTGGTGAGATCAGGAAGAATTGCAGGAGACCAAATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTTTTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAACTTGTCCAAAATTG
TTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTTCAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGACTGTTTCGTCAAC
GGGTGTGATGGATCAATTCTA
CTAGATGACACGTCATCTTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGATTTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGAGTC
GTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGCAATT
CTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCAAAACAGCTAGCTTAGCTGCTGCT
AATAGTGGTGTCATTCCTCCTCCTACCTCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGCCAAGGACATGGTTGCTTTATCCG
GAGCGCATACAATTGGGCAA
GCAAGGTGTGTAGCCTTCAGAAATCGCATATACAATGAAAGCAACATTGAAAGTTCATTTGCAAAGAATAGGCGAGGGAACTGCCCAAGGGCCACAGGATCAGGAGATAATAATCTAGCT
CCATTGGATTTTCAAAGTCCAAATAAATTTGACAACCAGTACTACAAGCACCTCTTAAACCAAAAGGGCTTACTTCACTCTGATCAAATCTTATTCAATGGAGGATCCACTGATTCTTTG
GTCAGTACATATGCCAGTAACTCTAAAACTTTCAATTCTGATTTTGCTGCTGCAATGATCAAGATGGGAGATATCAGTCCACTCACCGGATCCATTGGTGAGATCAGGAAGAATTGCAGG
AGACCAAATTGA

Retrieve as FASTA