Entry information : CbraMSD01 (g32597/CHBRA404g00120)
Entry ID 13793
Creation 2016-06-21 (Christophe Dunand)
Last sequence changes 2016-06-21 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: CbraMSD01 (g32597/CHBRA404g00120)
Name (synonym) CbraMSD01 (g32597/CHBRA404g00120)
Class Mn SOD    [Orthogroup: MSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraMSD01
start..stop
S start..stop
CbraMSD02 362 3e-127 92..321 3..231
HaMSD01 167 5e-51 94..311 26..223
HaMSD02 165 3e-50 94..311 28..225
AtMSD01 163 3e-49 94..311 31..228
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 585188..585478 291 N° 2 590416..590609 194 N° 3 629728..629809 82 N° 4 639397..639801 405
join(585188..585478,590416..590609,629728..629809,639397..639801)


exon

Literature and cross-references CbraMSD01 (g32597/CHBRA404g00120)
Protein sequence: CbraMSD01 (g32597/CHBRA404g00120)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (307)
PWM (Da):   %s   34860.47 (33253.6)  
PI (pH):   %s   9.33 (9.33) Peptide Signal:   %s   cut: 17 range:17-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA  
Remarks Complete sequence from genomic. Longer 5' (80 aa) with no match
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2





Retrieve as FASTA