Entry information : CbraFer05
Entry ID 13833
Creation 2016-07-05 (Christophe Dunand)
Last sequence changes 2016-07-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-07-05 (Christophe Dunand)
Peroxidase information: CbraFer05
Name CbraFer05
Class Ferritin    [Orthogroup: Fer004]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraFer05
start..stop
S start..stop
KflFer05 186 9e-59 25..222 28..230
CbraFer03 153 2e-46 10..220 2..213
CbraFer01 150 7e-45 9..220 37..249
PpaFer03 143 5e-42 19..221 63..264
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1570265..1571047 783  
join(1570265..1571047)


exon

Literature and cross-references CbraFer05
Protein sequence: CbraFer05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   260
PWM (Da):   %s   29301.98  
PI (pH):   %s   7.45
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDLEKLQTTP VSELAAEVTV EGSCYNPNEE IKKMGGLQVL VPKDKSLTRQ HLDKHLEKQM VLGVNVVYST FYTFESLCIY SRRDTVALPG FSSYFTRRAV EHWRWAASLC WFLGRRGGNV  VLREIPPPPA VFHNPEKGDA LYMMEYALAL EKVEYEKMLE LFRAAEKSSD GGVMNFLQTE LLVPSVTAIK RCADYVSQLR LIGKTAGLFT FDRMLLREME EEGVGIGEVI EQQVTRQTRS 
EATGGLSRKR RRQGNAESAG 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTTGG AAAAGCTGCA GACGACCCCC GTGAGCGAAT TGGCGGCAGA GGTGACGGTG GAGGGCAGTT GTTATAATCC GAACGAGGAG ATAAAAAAAA TGGGAGGTCT GCAGGTATTG  GTTCCCAAGG ACAAGAGTTT GACACGTCAG CACCTGGATA AGCATCTGGA GAAGCAGATG GTTTTGGGAG TAAATGTCGT TTACTCGACC TTTTACACTT TCGAGTCGTT GTGCATTTAT  TCTCGACGGG ACACGGTAGC CTTGCCCGGG TTTTCCTCCT ACTTCACTCG GCGCGCAGTG GAACATTGGC GCTGGGCGGC GAGCTTGTGC TGGTTCCTTG GCCGTCGAGG CGGGAACGTG  GTGTTGCGGG AGATCCCCCC ACCTCCCGCC GTTTTCCATA ATCCGGAAAA GGGGGATGCA TTGTACATGA TGGAGTACGC GCTGGCGCTG GAGAAAGTGG AGTATGAGAA GATGCTGGAG  CTGTTTCGTG CCGCAGAGAA ATCCAGCGAC GGCGGCGTGA TGAACTTTTT GCAGACCGAG CTGCTTGTGC CGTCTGTTAC GGCAATCAAG CGCTGTGCAG ATTACGTCAG CCAGCTCAGA  CTGATTGGGA AGACAGCTGG GCTCTTCACG TTCGATCGCA TGCTGCTGAG GGAGATGGAG GAGGAGGGGG TCGGGATCGG GGAGGTGATC GAGCAGCAAG TGACAAGGCA AACGCGGTCC 
GAGGCGACTG GGGGGCTCTC ACGCAAGAGG AGGAGGCAGG GGAATGCCGA GAGCGCGGGC TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTTGG AAAAGCTGCA GACGACCCCC GTGAGCGAAT TGGCGGCAGA GGTGACGGTG GAGGGCAGTT GTTATAATCC GAACGAGGAG ATAAAAAAAA TGGGAGGTCT GCAGGTATTG  GTTCCCAAGG ACAAGAGTTT GACACGTCAG CACCTGGATA AGCATCTGGA GAAGCAGATG GTTTTGGGAG TAAATGTCGT TTACTCGACC TTTTACACTT TCGAGTCGTT GTGCATTTAT  TCTCGACGGG ACACGGTAGC CTTGCCCGGG TTTTCCTCCT ACTTCACTCG GCGCGCAGTG GAACATTGGC GCTGGGCGGC GAGCTTGTGC TGGTTCCTTG GCCGTCGAGG CGGGAACGTG  GTGTTGCGGG AGATCCCCCC ACCTCCCGCC GTTTTCCATA ATCCGGAAAA GGGGGATGCA TTGTACATGA TGGAGTACGC GCTGGCGCTG GAGAAAGTGG AGTATGAGAA GATGCTGGAG  CTGTTTCGTG CCGCAGAGAA ATCCAGCGAC GGCGGCGTGA TGAACTTTTT GCAGACCGAG CTGCTTGTGC CGTCTGTTAC GGCAATCAAG CGCTGTGCAG ATTACGTCAG CCAGCTCAGA  CTGATTGGGA AGACAGCTGG GCTCTTCACG TTCGATCGCA TGCTGCTGAG GGAGATGGAG GAGGAGGGGG TCGGGATCGG GGAGGTGATC GAGCAGCAAG TGACAAGGCA AACGCGGTCC 
GAGGCGACTG GGGGGCTCTC ACGCAAGAGG AGGAGGCAGG GGAATGCCGA GAGCGCGGGC TGA 

Retrieve as FASTA