Entry information : KflCSD01 (kfl00283_0250)
Entry ID 13862
Creation 2016-08-23 (Christophe Dunand)
Last sequence changes 2016-08-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: KflCSD01 (kfl00283_0250)
Name (synonym) KflCSD01 (kfl00283_0250)
Class Cu/Zn SOD    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiaceae Klebsormidium
Organism Klebsormidium flaccidum    [TaxId: 3175 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value KflCSD01
start..stop
S start..stop
PpaCSD03 122 2e-34 104..256 52..203
PpaCSD04 120 5e-34 140..256 80..201
LeCSD03 119 3e-33 83..256 41..214
MpCSD01 117 4e-33 139..257 32..155
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 110485..110851 367 N° 2 110088..110194 107 N° 3 109350..109481 132 N° 4 109060..109173 114
N° 5 108301..108354 54  
complement(join(108301..108354,109060..109173,109350..109481,110088..110194,1104 85..110851))


exon

Literature and cross-references KflCSD01 (kfl00283_0250)
Protein sequence: KflCSD01 (kfl00283_0250)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   257
PWM (Da):   %s   26070.19  
PI (pH):   %s   6.84
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACTVAIAFSGPAALTIGALVFRPEAAASVASSAVLPKSFWGLPVHAAPVPIHTRKLAVQAQCVGSFSEARAVGCQCGPECPRRDFLLGLALASAALAQPAEAAAAKVAVAKLVPTKGSTAFGEVTFTESSGFFGGRKVKVDVNIGGLSPGMHGFHIEIGDVTCDDGLCTGGHYNPSKKPHGAPGSEERHVGDLGNIRADNDGKVQTTLEDVVISLDGPSSIVGHSVVVHFGQDDLESQPSGNAGGRAAYATVRLV*

Retrieve as FASTA  
Remarks copper/zinc superoxide dismutase
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGCACTGTAGCAATTGCCTTTTCAGGCCCTGCTGCCCTTACTATTGGTGCTTTAGTCTTTCGTCCAGAAGCGGCTGCTTCTGTCGCAAGCTCCGCCGTCCTGCCAAAGTCATTT
TGGGGCCTTCCCGTGCATGCTGCCCCAGTGCCAATTCATACCCGAAAGCTCGCAGTCCAGGCACAATGTGTGGGCAGCTTCTCAGAAGCAAGGGCAGTGGGCTGCCAATGTGGGCCTGAG
TGCCCCCGGCGAGATTTCCTCCTCGGCCTCGCCCTAGCCAGCGCAGCATTGGCTCAGCCAGCTGAGGCAGCAGCTGCAAAGGTGGCAGTTGCCAAATTGGTTCCTACAAAGGGAAGCACG
GCTTTTG
GTATGTCTCCTTCCATGTCTAGAACAAGGCCCACTGAATGGTGCTTTTTGAAGTCGCCCACAGCATGTGTTGTGAGAATCTATGCCAGGAGTGCATCGTGGCCGCTGTTGTTG
ACCGGATAGTCATTCGCAGCAGTTGCTTGAGCTCCTCTGAGGTGGTTCTTTACTTCTTCCGCAGGTATTGTTCCAGAGTCCTATTTATCATTGTAGAAGAACAATTTTTAGTGGGCTTTA
AAGCCCCCAAAATGTGGACCCCGTCAACGTAATTTGCATCTCCTGCTCCTTGTACAGGTGAAGTTACATTCACAGAGTCGTCGGGCTTCTTTGGTGGCAGGAAAGTGAAGGTGGACGTCA
ATATTGGGGGTCTCTCCCCTGGTATGCATGGATTCCACATTCAT
GTGAGTCAGCTTGAGCAGACGCTTTAGTTTGGAGCGATGTACAGCTTCTTTCTCAGAACTCTGCTCCTTGGCGTCT
TGTCTCTCAGGATTTTGTCCCTTGGCAAAGAGTCTGCATTACTGTATGTGTTCTTTGCCTGATACTGGCAAGCAAACGAAAGTGAAGCCATGCAGGGCAATGAAGGGGGGGTGAAGAGGG
AGGGGCGGGGGAGGAGCGGGGGGAGGGGAAGGAAGGGGTAGGGGGGATGGGAAGGGAGGTGAAGGGGGATCGCTGACCCAGCCGTCCTTAGGTAGTGTCCAATGACCTGTGCGGAAGCAA
CATCGGGAGAAAAGTCGGTCAACTTTCTGCGCCCATTGGAAGTCTGGCTAAAACAAACCGTTCATAGGCTCGTTACTTCAGCGCAAGCACTGACAAATGAACCAACTCATGTTTAGGCAA
TGAACTTCGGCGCTCTGCTCCGTGCTGGCTCAAACTGACCGCGAGACAGAGGTGGTGGGACTGCTACCCCTGCCCATGTGTGCCTGTTAGAAATGAAGCCTGTGCTCGCAAAATAGTCAG
ATGCTAGGACTGCTGCGGTTCTGTTCATACTGGTCTCGATGTCGCTGCAGGAGATTGGCGATGTCACATGCGATGACGGCCTGTGCACGGGGGGGCACTACAACCCCAGCAAGAAGCCCC
ACGGGGCGCCTGGCAGCGAGGAGCGGCATGTGGGCGATCTGGGGAACATTCGGGCTGACAAC
GTAGGGCCAGCACAATGGCTGAGTTGCCGTCTGTGCCATCTGACCTGGATGTAACGAG
GCCTGCATCAGATCAGCAAGACTCGACGGGTGGAAGGATTTAGGCTCAATACTTGGCCATATTCTTAATCAGAGACACTTCCCTGAGTTGTGCGCCTGCTCATCTGCCTGCCTTGCAGGA
TGGCAAGGTCCAGACCACGCTGGAGGACGTTGTCATCAGCTTAGACGGGCCCAGCTCGATTGTGGGACACTCGGTGGTCGTCCATTTTGGTCAGGACGATCTGGAGTCTCAG
GTGGGGGT
CGCCTTGACTGTGTAGATTGTTGTTGCTTGACGGCTTGGTTATCTTTTGGTTAGATTGATGGCCTGCATGCTTACCTCTGGCTTTCTGCGGGTGGGCTTGTGTTTCTTCCATTTTTCGAC
TGGCTTCACCTTGAGCAGCTTGCTGTGATTCGATCGAAAATTGTGGGTCGGTGGGCAGGGTATCGAATTGACCCTTGATGCCTTGGGTGCCGGGGTTTCGATAGCTTACGCTCTTTGCCC
TCGTCAGAGCATGACCTCCACAACTCCAGTCGCTCCCGGCCTGAGAAATAAAGTCAATATCTTAACAAGAAGCAGACACTTACGCAGCTCCGCTAGGATCTTTGTGCTTAGCGGCGTGGC
CGCCACGTGGATAGCTGGCAGACTCGTTACAGAAAGGCAGCCCACGGTTGCCGGGGGTAACAAACAACTTTTTCATCAAGACTGTGACCAATGGCGGGATGGTTTCAATTCGTATTATAT
CGAGCCCTTCAGTCGTGATGTTATCTAAAAAGCTTAAAGTACCTTTGGATCTGATTGGATGGCCAAGCGGAGTACCGATTCAAGCAAACTTCCGTTAGTTTCCATTCCGGCGTGTACTGT
GGCCGTTCAGGTCCCGCTTCGTGCTTCTCTTGCTAGATATCTCGCTTCACGAGAATTCGGTCGAATTTAACGATGGCCCCACTCTGCTTCTTTGCAGCCATCAGGAAACGCCGGAGGTCG
AGCAGCGTATGCAACAGTGAGGCTGGTTTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGCACTGTAGCAATTGCCTTTTCAGGCCCTGCTGCCCTTACTATTGGTGCTTTAGTCTTTCGTCCAGAAGCGGCTGCTTCTGTCGCAAGCTCCGCCGTCCTGCCAAAGTCATTT
TGGGGCCTTCCCGTGCATGCTGCCCCAGTGCCAATTCATACCCGAAAGCTCGCAGTCCAGGCACAATGTGTGGGCAGCTTCTCAGAAGCAAGGGCAGTGGGCTGCCAATGTGGGCCTGAG
TGCCCCCGGCGAGATTTCCTCCTCGGCCTCGCCCTAGCCAGCGCAGCATTGGCTCAGCCAGCTGAGGCAGCAGCTGCAAAGGTGGCAGTTGCCAAATTGGTTCCTACAAAGGGAAGCACG
GCTTTTG
GTGAAGTTACATTCACAGAGTCGTCGGGCTTCTTTGGTGGCAGGAAAGTGAAGGTGGACGTCAATATTGGGGGTCTCTCCCCTGGTATGCATGGATTCCACATTCATGAGATT
GGCGATGTCACATGCGATGACGGCCTGTGCACGGGGGGGCACTACAACCCCAGCAAGAAGCCCCACGGGGCGCCTGGCAGCGAGGAGCGGCATGTGGGCGATCTGGGGAACATTCGGGCT
GACAAC
GATGGCAAGGTCCAGACCACGCTGGAGGACGTTGTCATCAGCTTAGACGGGCCCAGCTCGATTGTGGGACACTCGGTGGTCGTCCATTTTGGTCAGGACGATCTGGAGTCTCAG
CCATCAGGAAACGCCGGAGGTCGAGCAGCGTATGCAACAGTGAGGCTGGTTTAG

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTCTTCACTA ATTACAAACG TGAAGAATTA ACAAATTTGC AATCCGTTCT CAAGCACTCT CAAGGACCAC CTAGGGTGCG AATCTGTACA GCTCTCCGCT TTCCAGTCCT CTTGTCCAGC  AGAATGGCGT GCACTGTAGC AATTGCCTTT TCAGGCCCTG CTGCCCTTAC TATTGGTGCT TTAGTCTTTC GTCCAGAAGC GGCTGCTTCT GTCGCAAGCT CCGCCGTCCT GCCAAAGTCA  TTTTGGGGCC TTCCCGTGCA TGCTGCCCCA GTGCCAATTC ATACCCGAAA GCTCGCAGTC CAGGCACAAT GTGTGGGCAG CTTCTCAGAA GCAAGGGCAG TGGGCTGCCA ATGTGGGCCT  GAGTGCCCCC GGCGAGATTT CCTCCTCGGC CTCGCCCTAG CCAGCGCAGC ATTGGCTCAG CCAGCTGAGG CAGCAGCTGC AAAGGTGGCA GTTGCCAAAT TGGTTCCTAC AAAGGGAAGC  ACGGCTTTTG GTGAAGTTAC ATTCACAGAG TCGTCGGGCT TCTTTGGTGG CAGGAAAGTG AAGGTGGACG TCAATATTGG GGGTCTCTCC CCTGGTATGC ATGGATTCCA CATTCATGAG  ATTGGCGATG TCACATGCGA TGACGGCCTG TGCACGGGGG GGCACTACAA CCCCAGCAAG AAGCCCCACG GGGCGCCTGG CAGCGAGGAG CGGCATGTGG GCGATCTGGG GAACATTCGG  GCTGACAACG ATGGCAAGGT CCAGACCACG CTGGAGGACG TTGTCATCAG CTTAGACGGG CCCAGCTCGA TTGTGGGACA CTCGGTGGTC GTCCATTTTG GTCAGGACGA TCTGGAGTCT  CAGCCATCAG GAAACGCCGG AGGTCGAGCA GCGTATGCAA CAGTGAGGCT GGTTTAGCTA AGCAGAGACC CGCAGGTAAA TACTGGGCTT GGTGAACGTA AGACAGGTTA GGAGGTTGCT  TCGGACCTCG AGGGAAGATC AATCGAGTCG TTTTGCACTC TGTTGACTCG ATCGGTTGAG CGTCGAGACG GACAAGCATG TGTCTGTCTT TTCGCAAGCA AGGAATCGAA GTGAAGCGGC  CTCGCTGGCA TTCAGAGGAG AGAAAGTTCA AATCCTGCAG AAGAAACACG ACGGTCGACC CAAATCGTTG CAAAAATCAA AGGAGTTGAG AGCGAATGAT GTTGCTTAAG CATTCCCTTA  GGAGTACATG ATCACAGCTA CCGAGACTTT GATAGTAAAG TGTACCATAT AGATGTGACA GTGAGCTGTC CGCGGGACGT GAATTTTGTC GATTGTTATA AGCCGGGAAT GAACATCTAA 
GTCTGTATAA CGGCCGAGAT GTATGCATCT AACGGCAAAT CATCCAGTCG GCCGCGGCTC GAC 

Retrieve as FASTA