Entry information : RaPrx02
Entry ID 1389
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2015-12-10 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-15 (Christophe Dunand)
Peroxidase information: RaPrx02
Name RaPrx02
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Grossulariaceae Ribes
Organism Ribes americanum    [TaxId: 3802 ]
Cellular localisation N/D
Tissue types Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RaPrx02
start..stop
S start..stop
PtPrx67 352 4e-123 1..224 1..227
PePrx02 345 5e-122 23..224 26..227
PpePrx02 348 1e-121 8..224 16..230
GrPrx32 346 6e-121 22..223 24..223
Literature and cross-references RaPrx02
Literature dePamphilis,C. et al., (2004) unpublished
EST ref. GenBank:   CV458357.1 [Fragment]
Protein sequence: RaPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224 (197)
PWM (Da):   %s   23497.95 (20657.4)  
PI (pH):   %s   6.22 (6.34) Peptide Signal:   %s   cut: 28 range:28-224
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MANAIISLTS LLFITLHLCA IVSDAQTTPP LAQGLSWSFY KSSCPKLESI VRKQLKKVFD ADIGQAAGLL RLHFHDCFVQ GCDGSVLLDG SASGPSEQDA PPNLTLRPKA FEIINDLLSR 
AHKQCGQVVS CSDIAALAAR DAVYLSGGPD YEVPLGRRDG LSFATEAATL ANLPAPSSNA SVILTSLATK NLDATDVVAL SGGHTIGISH CSSFTDRLYP NQDP 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5',mRNA sequence.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTCTCCAAA TTCAAGTCCA TCATGGCTAA TGCTATTATT TCTCTCACCT CTCTCCTTTT TATCACCTTA CATTTGTGTG CCATTGTCTC AGATGCACAG ACCACACCTC CTTTAGCCCA  AGGACTCTCA TGGAGCTTTT ACAAATCTAG CTGCCCTAAA CTTGAATCCA TCGTCAGAAA ACAGCTCAAG AAAGTGTTCG ACGCTGATAT TGGCCAAGCT GCTGGCTTGC TTCGCCTCCA  CTTTCATGAC TGCTTTGTTC AGGGGTGTGA TGGCTCAGTC TTGCTAGATG GTTCAGCAAG TGGTCCAAGT GAGCAAGACG CTCCTCCGAA CCTGACTTTG AGACCAAAGG CATTTGAGAT  CATCAACGAT CTCCTTAGTC GCGCCCACAA GCAGTGCGGA CAAGTCGTCT CTTGCTCTGA CATCGCTGCT CTTGCTGCTC GTGACGCTGT TTACTTGTCT GGTGGTCCGG ATTATGAAGT  CCCATTAGGA AGACGCGATG GATTGAGTTT TGCAACAGAA GCAGCAACTC TAGCCAACCT TCCCGCGCCT TCAAGCAACG CTAGTGTCAT TCTCACATCT CTAGCCACCA AAAATCTCGA 
TGCCACTGAC GTTGTAGCTC TATCCGGTGG CCATACCATT GGTATTAGCC ATTGCTCCTC TTTCACAGAT CGCCTTTACC CTAACCAAGA CCCGAC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTAATG CTATTATTTC TCTCACCTCT CTCCTTTTTA TCACCTTACA TTTGTGTGCC ATTGTCTCAG ATGCACAGAC CACACCTCCT TTAGCCCAAG GACTCTCATG GAGCTTTTAC  AAATCTAGCT GCCCTAAACT TGAATCCATC GTCAGAAAAC AGCTCAAGAA AGTGTTCGAC GCTGATATTG GCCAAGCTGC TGGCTTGCTT CGCCTCCACT TTCATGACTG CTTTGTTCAG  GGGTGTGATG GCTCAGTCTT GCTAGATGGT TCAGCAAGTG GTCCAAGTGA GCAAGACGCT CCTCCGAACC TGACTTTGAG ACCAAAGGCA TTTGAGATCA TCAACGATCT CCTTAGTCGC  GCCCACAAGC AGTGCGGACA AGTCGTCTCT TGCTCTGACA TCGCTGCTCT TGCTGCTCGT GACGCTGTTT ACTTGTCTGG TGGTCCGGAT TATGAAGTCC CATTAGGAAG ACGCGATGGA  TTGAGTTTTG CAACAGAAGC AGCAACTCTA GCCAACCTTC CCGCGCCTTC AAGCAACGCT AGTGTCATTC TCACATCTCT AGCCACCAAA AATCTCGATG CCACTGACGT TGTAGCTCTA 
TCCGGTGGCC ATACCATTGG TATTAGCCAT TGCTCCTCTT TCACAGATCG CCTTTACCCT AACCAAGACC CG 

Retrieve as FASTA