Entry information : PpaGOX02 (Pp3c22_7690)
Entry ID 13908
Creation 2016-10-14 (Christophe Dunand)
Last sequence changes 2016-10-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-14 (Christophe Dunand)
Peroxidase information: PpaGOX02 (Pp3c22_7690)
Name (synonym) PpaGOX02 (Pp3c22_7690)
Class Glycolate Oxidase    [Orthogroup: GOX001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaGOX02
start..stop
S start..stop
PpaGOX01 711 0 1..368 1..368
PpaGOX03 698 0 1..368 1..368
MpGOX01 635 0 4..364 6..366
HaGOX09 628 0 5..360 2..357
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 579..724 146 N° 2 853..1427 575 N° 3 1554..1759 206 N° 4 1901..2080 180
join(579..724,853..1427,1554..1759,1901..2080)


exon

Literature and cross-references PpaGOX02 (Pp3c22_7690)
Cluster/Prediction ref. Genebank:   5917397
Protein sequence: PpaGOX02 (Pp3c22_7690)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   369
PWM (Da):   %s   40335.34  
PI (pH):   %s   9.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATAEVTNVTEYEELARQKLPKMVFDYYASGAEDQWTLRENRNAFERIRFRPRILIDVTKVDLTTNVLGFNISMPIMVAPTAMQRMAHPDGELATARAVSKAGTIMTLSSWATSSVEEVASVGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFALPSHLTLANFEGLDLGKMDKTQDSGLASYVAGQIDRSLSWKDVKWLQTITKLPILVKGVITAETQLAIQSGAAGIIVSNHGARQLDYVSATISALEEVVLAARGRVPVFLDGGVRRGTDVLKALALGASGVVGRPVVFGLATDGQKGVEKVLQMLRDEFELAMALAGCTKVSDIKRSHIQTEAERLYSKL*

Retrieve as FASTA  
Remarks (Chromo 22, 3 introns)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTGCCGAGGTTACCAATGTGACCGAGTATGAAGAACTCGCAAGGCAGAAGCTCCCGAAGATGGTGTTCGACTACTACGCTTCAGGTGCTGAGGACCAGTGGACCTTGAGAGAG
AATCGCAACGCTTTCGAGCGTATCAG
GTATGTCGTGTCGCGCCCGAATGTGTGCATCCTCTCCACTTTCTAGTTGTGATCACCATGACAGTGCTGATAAAAAAATCTCTGCGACTTTCCC
AGCTTGGAATTCATTAACTGTGATAAGTATGCAGATTCCGGCCCCGCATCCTCATCGACGTTACGAAGGTGGATCTGACCACCAACGTATTGGGCTTCAACATCTCCATGCCCATCATGG
TCGCTCCCACCGCCATGCAGAGGATGGCGCACCCGGACGGTGAATTGGCCACCGCCAGGGCTGTTTCAAAAGCTGGGACGATCATGACGCTGTCGTCGTGGGCGACCAGCAGCGTGGAGG
AGGTCGCGTCCGTAGGACCTGGCATCCGCTTCTTCCAGCTCTACGTGTACAAGGATAGGAACGTAGTCGCCCAGCTCGTACGCCGCGCTGAGAGAGCCGGCTTCAAGGCCATCGCCCTTA
CCGTCGACACCCCTCGCCTTGGACGCAGAGAGTCAGACATCAAGAACAGATTCGCTCTGCCAAGTCACCTCACTCTCGCCAACTTCGAGGGTCTGGATCTCGGAAAGATGGATAAGACTC
AGGACTCTGGATTGGCTTCTTACGTCGCCGGCCAAATCGACAGGTCTCTGAGCTGGAAGGATGTGAAATGGCTGCAGACCATCACCAAGCTCCCAATCCTCGTCAAGGGAGTCATCACTG
CTGAAGATA
GTAAGCGCGTCCTTCATGTCCTGAGCACCAATTCACCATTTAGAAACCTGAACCTGATTCCAGATTGCCATTTGTTTGCAACTACTTCCTGCAACTAAAGTTTTGTGCATG
AAATTGATGCTGCAGCCCAGCTCGCCATTCAAAGCGGAGCCGCAGGTATTATAGTATCAAACCACGGCGCCCGACAGCTGGACTATGTCTCAGCAACCATCTCAGCTCTCGAGGAGGTTG
TGCTAGCCGCACGCGGCAGGGTACCAGTCTTCCTGGATGGAGGAGTCCGACGTGGAACCGACGTTCTCAAAGCCCTGGCTCTCGGAGCATCTGGTGTCTTT
GTGCGTAACCCAAAACACT
ACCCCCCCCCCCCTGTTCGAATCGGTTCCCTAGCTTACTGTGTCGCCACCTCGTGATGATCACTGATTTACCCGACCCATCGAACCTCGATGCATGACTGAAACGATGTGGTGTTTGCTC
AGGTTGGAAGACCCGTAGTGTTCGGCTTGGCAACGGACGGCCAGAAGGGGGTGGAGAAAGTGTTGCAGATGCTGAGGGACGAGTTTGAGCTGGCGATGGCGTTGGCCGGATGCACGAAAG
TGTCTGACATCAAACGCTCCCACATTCAAACCGAAGCGGAGCGACTGTACTCCAAGCTGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTGCCGAGGTTACCAATGTGACCGAGTATGAAGAACTCGCAAGGCAGAAGCTCCCGAAGATGGTGTTCGACTACTACGCTTCAGGTGCTGAGGACCAGTGGACCTTGAGAGAG
AATCGCAACGCTTTCGAGCGTATCAG
ATTCCGGCCCCGCATCCTCATCGACGTTACGAAGGTGGATCTGACCACCAACGTATTGGGCTTCAACATCTCCATGCCCATCATGGTCGCTCCC
ACCGCCATGCAGAGGATGGCGCACCCGGACGGTGAATTGGCCACCGCCAGGGCTGTTTCAAAAGCTGGGACGATCATGACGCTGTCGTCGTGGGCGACCAGCAGCGTGGAGGAGGTCGCG
TCCGTAGGACCTGGCATCCGCTTCTTCCAGCTCTACGTGTACAAGGATAGGAACGTAGTCGCCCAGCTCGTACGCCGCGCTGAGAGAGCCGGCTTCAAGGCCATCGCCCTTACCGTCGAC
ACCCCTCGCCTTGGACGCAGAGAGTCAGACATCAAGAACAGATTCGCTCTGCCAAGTCACCTCACTCTCGCCAACTTCGAGGGTCTGGATCTCGGAAAGATGGATAAGACTCAGGACTCT
GGATTGGCTTCTTACGTCGCCGGCCAAATCGACAGGTCTCTGAGCTGGAAGGATGTGAAATGGCTGCAGACCATCACCAAGCTCCCAATCCTCGTCAAGGGAGTCATCACTGCTGAAGAT
A
CCCAGCTCGCCATTCAAAGCGGAGCCGCAGGTATTATAGTATCAAACCACGGCGCCCGACAGCTGGACTATGTCTCAGCAACCATCTCAGCTCTCGAGGAGGTTGTGCTAGCCGCACGC
GGCAGGGTACCAGTCTTCCTGGATGGAGGAGTCCGACGTGGAACCGACGTTCTCAAAGCCCTGGCTCTCGGAGCATCTGGTGTCTTT
GTTGGAAGACCCGTAGTGTTCGGCTTGGCAACG
GACGGCCAGAAGGGGGTGGAGAAAGTGTTGCAGATGCTGAGGGACGAGTTTGAGCTGGCGATGGCGTTGGCCGGATGCACGAAAGTGTCTGACATCAAACGCTCCCACATTCAAACCGAA
GCGGAGCGACTGTACTCCAAGCTGTAA

Retrieve as FASTA