Entry information : PpaFSD01 (Pp3c7_19790/FeSOD)
Entry ID 13912
Creation 2016-10-14 (Christophe Dunand)
Last sequence changes 2016-10-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: PpaFSD01 (Pp3c7_19790/FeSOD)
Name (synonym) PpaFSD01 (Pp3c7_19790/FeSOD)
Class FeSOD    [Orthogroup: FSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaFSD01
start..stop
S start..stop
PpaFSD02 360 4e-127 32..280 2..252
CbraFSD01 296 4e-101 56..271 50..292
MpFSD01 290 8e-99 26..279 30..286
AtFSD02 260 5e-87 67..268 51..268
Literature and cross-references PpaFSD01 (Pp3c7_19790/FeSOD)
Protein sequence: PpaFSD01 (Pp3c7_19790/FeSOD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   281 (249)
PWM (Da):   %s   31874.37 (28284.3)  
PI (pH):   %s   8.7 (7.32) Peptide Signal:   %s   cut: 32 range:32-280
Sequence
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Send to Peroxiscan
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MGLRVSGIAL RRVVVVVVVV RFQLWENQAM ATSSLAGSVF SSNTLRNPIG NVATMRKRLV RMRAPRAEFQ LRPLPYELDA LEPHMSKETL EFHWGKHHKA YVDNLNKQVE GTEAERQNLS  ELVLSAYNDG NPKAYFNNAG QIWNHEFFWS SMSPSGGGEP QGELLELISS NFVSYKEFAE QFKRAAGSQF GSGWVWLVLR KDGKLEILKT PNALTPIVWD HIPLLVVDVW EHAYYLDYHN 
QRPKYLSKFL DNLVSWQAVG ERLAQAKAFV NYGEPVTSEL * 

Retrieve as FASTA  
Remarks (Chromo 7, no intron)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGCTCA GGGTTTCGGG GATTGCGTTG AGGAGAGTTG TTGTTGTTGT TGTTGTTGTG AGGTTTCAGC TTTGGGAGAA TCAGGCTATG GCGACCAGCA GCTTAGCAGG ATCGGTCTTT  TCGTCGAACA CACTTCGAAA CCCTATTGGG AATGTGGCCA CTATGCGGAA GAGGCTCGTG CGAATGCGGG CACCACGAGC TGAGTTTCAG CTGCGGCCTC TACCCTACGA GCTGGACGCA  TTGGAGCCTC ACATGAGCAA GGAGACGCTG GAGTTTCACT GGGGCAAGCA CCACAAGGCG TACGTGGACA ATCTTAACAA GCAGGTAGAG GGCACTGAGG CGGAGCGGCA GAATTTGAGC  GAGCTGGTGC TGTCCGCTTA CAACGACGGG AATCCGAAAG CTTATTTTAA TAACGCCGGG CAGATTTGGA ACCACGAGTT TTTCTGGTCG TCTATGTCTC CGAGTGGTGG CGGAGAGCCT  CAGGGAGAGC TTCTGGAGCT CATTTCCAGC AATTTTGTCT CCTACAAGGA ATTCGCGGAG CAGTTCAAGA GAGCTGCTGG GTCCCAATTT GGGTCCGGAT GGGTGTGGCT GGTGCTGCGG  AAGGACGGGA AACTTGAGAT TCTCAAGACG CCGAACGCTC TCACGCCCAT TGTGTGGGAT CATATTCCTT TGTTGGTTGT GGACGTGTGG GAGCATGCTT ACTATTTGGA TTACCATAAC  CAGAGACCGA AGTATTTGTC AAAGTTTTTG GATAATTTGG TGTCGTGGCA AGCAGTAGGG GAGCGGCTTG CACAAGCTAA GGCTTTTGTC AATTACGGGG AGCCCGTCAC TTCTGAGTTG 
TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGCTCA GGGTTTCGGG GATTGCGTTG AGGAGAGTTG TTGTTGTTGT TGTTGTTGTG AGGTTTCAGC TTTGGGAGAA TCAGGCTATG GCGACCAGCA GCTTAGCAGG ATCGGTCTTT  TCGTCGAACA CACTTCGAAA CCCTATTGGG AATGTGGCCA CTATGCGGAA GAGGCTCGTG CGAATGCGGG CACCACGAGC TGAGTTTCAG CTGCGGCCTC TACCCTACGA GCTGGACGCA  TTGGAGCCTC ACATGAGCAA GGAGACGCTG GAGTTTCACT GGGGCAAGCA CCACAAGGCG TACGTGGACA ATCTTAACAA GCAGGTAGAG GGCACTGAGG CGGAGCGGCA GAATTTGAGC  GAGCTGGTGC TGTCCGCTTA CAACGACGGG AATCCGAAAG CTTATTTTAA TAACGCCGGG CAGATTTGGA ACCACGAGTT TTTCTGGTCG TCTATGTCTC CGAGTGGTGG CGGAGAGCCT  CAGGGAGAGC TTCTGGAGCT CATTTCCAGC AATTTTGTCT CCTACAAGGA ATTCGCGGAG CAGTTCAAGA GAGCTGCTGG GTCCCAATTT GGGTCCGGAT GGGTGTGGCT GGTGCTGCGG  AAGGACGGGA AACTTGAGAT TCTCAAGACG CCGAACGCTC TCACGCCCAT TGTGTGGGAT CATATTCCTT TGTTGGTTGT GGACGTGTGG GAGCATGCTT ACTATTTGGA TTACCATAAC  CAGAGACCGA AGTATTTGTC AAAGTTTTTG GATAATTTGG TGTCGTGGCA AGCAGTAGGG GAGCGGCTTG CACAAGCTAA GGCTTTTGTC AATTACGGGG AGCCCGTCAC TTCTGAGTTG 
TAG 

Retrieve as FASTA