Entry information : PpaFSD02 (Pp3c2_27440/FeSOD)
Entry ID 13913
Creation 2016-10-14 (Christophe Dunand)
Last sequence changes 2016-10-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: PpaFSD02 (Pp3c2_27440/FeSOD)
Name (synonym) PpaFSD02 (Pp3c2_27440/FeSOD)
Class FeSOD    [Orthogroup: FSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaFSD02
start..stop
S start..stop
PpaFSD01 360 5e-127 2..252 32..280
MpFSD01 281 9e-96 1..251 36..286
CbraFSD01 271 2e-91 14..246 44..295
AtFSD03 254 2e-85 37..250 48..261
Literature and cross-references PpaFSD02 (Pp3c2_27440/FeSOD)
Protein sequence: PpaFSD02 (Pp3c2_27440/FeSOD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   253
PWM (Da):   %s   28664.4  
PI (pH):   %s   6.09
Sequence
Send to BLAST
Send to Peroxiscan
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MAATFASSCF TSNLLQNPSK CVTISRRRIG SVGVPTAEFH LRDLPYELDA LEPHMSKKTL EFHWGKHHGG YVANLNKQIA GTDAERLNLS ELVLSGYNNG NPLSYFNNAG QIWNHDFFWM  SMCQGGGGAP PEDSELLDLI VRNFESFEQF SERFKEAGRS LFGSGWVWLV LKKDAKLEIM KTSNALTPIV WNHIPLLVVD VWEHAYYLDY QNKRPDYLTE FLDNLVSWKV AEERLQRAKA 
FVNIGEPVIP DL* 

Retrieve as FASTA  
Remarks (chromo 2, no intron)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCAA CCTTCGCTAG CTCGTGCTTC ACCTCTAATT TGCTTCAAAA CCCCAGCAAA TGTGTCACGA TTTCGCGGAG AAGAATTGGG TCGGTAGGCG TTCCAACAGC CGAGTTCCAT  TTGCGTGATC TTCCATATGA GCTGGACGCA TTGGAGCCCC ACATGAGCAA GAAGACGCTG GAGTTTCACT GGGGGAAGCA CCACGGGGGC TATGTGGCGA ATCTCAACAA GCAGATAGCT  GGCACTGACG CAGAGCGGTT GAACTTGAGC GAGCTGGTGC TGTCGGGGTA TAACAACGGT AACCCACTGT CGTATTTCAA CAACGCCGGG CAGATTTGGA ACCACGATTT TTTTTGGATG  TCGATGTGCC AGGGCGGGGG CGGGGCGCCG CCAGAGGACA GTGAGCTCCT CGATCTTATT GTGAGGAACT TTGAGTCGTT TGAGCAGTTT TCGGAGAGGT TCAAGGAAGC TGGCAGGTCT  CTGTTCGGGT CTGGGTGGGT GTGGCTGGTG TTGAAGAAGG ACGCGAAGCT GGAGATTATG AAGACGTCGA ATGCTCTTAC ACCCATTGTC TGGAATCATA TCCCCTTGCT GGTCGTAGAC  GTCTGGGAGC ATGCTTATTA TCTTGACTAT CAGAACAAGA GACCCGATTA CTTGACGGAA TTTTTGGACA ATTTGGTATC CTGGAAGGTA GCAGAGGAGC GTCTGCAGCG GGCGAAGGCA 
TTTGTGAACA TAGGGGAACC AGTCATTCCC GATTTGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCAA CCTTCGCTAG CTCGTGCTTC ACCTCTAATT TGCTTCAAAA CCCCAGCAAA TGTGTCACGA TTTCGCGGAG AAGAATTGGG TCGGTAGGCG TTCCAACAGC CGAGTTCCAT  TTGCGTGATC TTCCATATGA GCTGGACGCA TTGGAGCCCC ACATGAGCAA GAAGACGCTG GAGTTTCACT GGGGGAAGCA CCACGGGGGC TATGTGGCGA ATCTCAACAA GCAGATAGCT  GGCACTGACG CAGAGCGGTT GAACTTGAGC GAGCTGGTGC TGTCGGGGTA TAACAACGGT AACCCACTGT CGTATTTCAA CAACGCCGGG CAGATTTGGA ACCACGATTT TTTTTGGATG  TCGATGTGCC AGGGCGGGGG CGGGGCGCCG CCAGAGGACA GTGAGCTCCT CGATCTTATT GTGAGGAACT TTGAGTCGTT TGAGCAGTTT TCGGAGAGGT TCAAGGAAGC TGGCAGGTCT  CTGTTCGGGT CTGGGTGGGT GTGGCTGGTG TTGAAGAAGG ACGCGAAGCT GGAGATTATG AAGACGTCGA ATGCTCTTAC ACCCATTGTC TGGAATCATA TCCCCTTGCT GGTCGTAGAC  GTCTGGGAGC ATGCTTATTA TCTTGACTAT CAGAACAAGA GACCCGATTA CTTGACGGAA TTTTTGGACA ATTTGGTATC CTGGAAGGTA GCAGAGGAGC GTCTGCAGCG GGCGAAGGCA 
TTTGTGAACA TAGGGGAACC AGTCATTCCC GATTTGTAA 

Retrieve as FASTA