Entry information : RaPrx05
Entry ID 1392
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2015-12-15 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: RaPrx05
Name RaPrx05
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Grossulariaceae Ribes
Organism Ribes americanum    [TaxId: 3802 ]
Cellular localisation N/D
Tissue types Buds
Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RaPrx05
start..stop
S start..stop
RcPrx46 289 2e-100 3..171 115..281
PpePrx02 282 1e-96 3..171 190..357
MdPrx09 276 2e-94 3..171 172..338
FvPrx01 275 5e-94 3..171 188..355
Literature and cross-references RaPrx05
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   DT597666.1 [Fragment]
Protein sequence: RaPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   171
PWM (Da):   %s   18819.28  
PI (pH):   %s   6.1
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGLTSLATKN LDATDVVALS GGHTIGISHC SSFTDRLYPT QDPTLDKTFA NDLKGVCPTN TTNSTTNLDI RSPNKFDNKY YVDLMNRQGL FTSDQDLYTD KRTREIVKSF AVNQTLFFEK 
FVFSMLKMGQ LSVLTGTQGE IRANCSVRNS HNTYLASVVT DVEEHEALSE F 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAGGGCTCA CATCTCTAGC CACCAAAAAT CTCGATGCCA CTGACGTTGT AGCTCTATCC GGTGGCCATA CCATTGGTAT TAGCCATTGC TCCTCTTTCA CAGATCGCCT TTACCCTACC  CAAGACCCGA CTCTCGACAA GACCTTTGCC AATGACCTTA AAGGTGTTTG TCCAACAAAT ACAACCAATA GCACTACCAA TCTGGACATT CGTAGTCCTA ACAAGTTTGA TAATAAGTAC  TACGTTGATC TCATGAACCG TCAAGGACTT TTCACGTCCG ATCAAGACTT GTATACTGAT AAGAGAACAC GAGAAATCGT TAAAAGCTTT GCTGTAAACC AAACATTGTT CTTCGAGAAG  TTTGTGTTTT CGATGCTGAA AATGGGACAA TTGAGCGTGT TGACAGGGAC ACAAGGTGAA ATTCGTGCGA ATTGTTCGGT TAGGAATTCA CATAATACAT ATCTAGCTTC TGTGGTTACA 
GATGTGGAGG AACACGAAGC TTTGTCTGAA TTC 

Retrieve as FASTA