Entry information : CbraGrxC04 (g18876 /CHBRA222g00290)
Entry ID 13955
Creation 2016-10-19 (Christophe Dunand)
Last sequence changes 2016-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-20 (Christophe Dunand)
Peroxidase information: CbraGrxC04 (g18876 /CHBRA222g00290)
Name (synonym) CbraGrxC04 (g18876 /CHBRA222g00290)
Class CGYC Grx    [Orthogroup: GrxC005]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraGrxC04
start..stop
S start..stop
HaGrxC03 140 3e-44 15..121 17..123
MpalGrxC01 139 1e-43 30..130 45..143
MpGrxC01 138 4e-43 15..122 31..138
AtGrxC04 135 3e-42 9..121 13..125
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1466157..1466567 411  
complement(join(1466157..1466567))


exon

Literature and cross-references CbraGrxC04 (g18876 /CHBRA222g00290)
Protein sequence: CbraGrxC04 (g18876 /CHBRA222g00290)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   137 (113)
PWM (Da):   %s   14772.43 (12294.1)  
PI (pH):   %s   5.9 (5.16) Peptide Signal:   %s   cut: 24 range:24-136
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKTAAAGWLF AGCLVASIIF SRADDSASAF VKTTIASNPL VIFSKSYCPY CKRAKNVFKE LKETPYVVEL DLRDDGGSIQ EEIGKMHGVW TVPQVFIGGQ RLGGSDDTVA AYSSGKLQKM 
LDDLKKSSGE SENYDL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGACCG CAGCAGCAGG CTGGCTGTTT GCCGGATGTC TGGTGGCATC TATCATATTC TCACGAGCAG ACGACAGTGC CAGTGCCTTC GTCAAGACGA CAATAGCGTC CAACCCTCTG  GTGATCTTCT CGAAATCGTA CTGCCCCTAC TGTAAGCGGG CGAAAAATGT GTTCAAGGAG CTGAAAGAGA CGCCGTATGT GGTGGAACTT GACCTTCGCG ATGACGGGGG GTCGATTCAA  GAGGAGATTG GGAAGATGCA TGGGGTGTGG ACTGTGCCTC AGGTCTTCAT TGGTGGACAA CGCCTTGGTG GATCTGACGA TACAGTGGCA GCGTACTCGT CAGGCAAACT TCAGAAGATG 
CTGGATGATC TGAAGAAGTC GTCCGGTGAA TCGGAAAACT ATGATTTATG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGACCG CAGCAGCAGG CTGGCTGTTT GCCGGATGTC TGGTGGCATC TATCATATTC TCACGAGCAG ACGACAGTGC CAGTGCCTTC GTCAAGACGA CAATAGCGTC CAACCCTCTG  GTGATCTTCT CGAAATCGTA CTGCCCCTAC TGTAAGCGGG CGAAAAATGT GTTCAAGGAG CTGAAAGAGA CGCCGTATGT GGTGGAACTT GACCTTCGCG ATGACGGGGG GTCGATTCAA  GAGGAGATTG GGAAGATGCA TGGGGTGTGG ACTGTGCCTC AGGTCTTCAT TGGTGGACAA CGCCTTGGTG GATCTGACGA TACAGTGGCA GCGTACTCGT CAGGCAAACT TCAGAAGATG 
CTGGATGATC TGAAGAAGTC GTCCGGTGAA TCGGAAAACT ATGATTTATG A 

Retrieve as FASTA