Entry information : PpaTrxM04 (Pp3c16_11170)
Entry ID 14198
Creation 2016-10-27 (Christophe Dunand)
Last sequence changes 2016-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-11-08 (Christophe Dunand)
Peroxidase information: PpaTrxM04 (Pp3c16_11170)
Name (synonym) PpaTrxM04 (Pp3c16_11170)
Class Thioredoxin Type M    [Orthogroup: TrxM001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaTrxM04
start..stop
S start..stop
AtTrxM02 184 5e-60 43..190 39..185
HaTrxM06 182 1e-59 43..190 26..163
AtTrxM01 181 9e-59 43..190 37..179
HaTrxM03 180 1e-58 43..190 41..185
Literature and cross-references PpaTrxM04 (Pp3c16_11170)
Protein sequence: PpaTrxM04 (Pp3c16_11170)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191
PWM (Da):   %s   19936.51  
PI (pH):   %s   8.61
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVLVEAGVV VGCAAQLAQT VASSLSASSS NAPRVVGMGV RCLPVARGLR IDASRTKLAS LGPSQSSVRA QRRGIVCEAQ ETVTGVAGVV NETTWKELVL ESDIPVLVDF WAPWCGPCRM 
IAPLIDEIAK AYAGKVKCLK LNTDESPGIA TEYGIRSIPT VMVFKGGEKK DTVIGAVPKS TLTSTLEKHL * 

Retrieve as FASTA  
Remarks 1 intron
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGTGC TGGTGGAGGC AGGGGTGGTA GTTGGGTGCG CGGCCCAGCT GGCCCAGACT GTCGCCTCGT CGCTCTCGGC GTCGAGCTCC AATGCGCCCC GCGTGGTGGG CATGGGCGTG  CGCTGCCTGC CCGTCGCTCG TGGCCTCCGA ATCGACGCAT CCAGGACGAA ATTGGCGTCG CTGGGCCCTT CGCAGAGCTC CGTCCGGGCG CAGAGGAGAG GGATTGTCTG TGAAGCCCAA  GAAACTGTCA CCGGAGGTCT CTCCTTCTCG CTCTCCCTCT CTTTCTACGG TCTTTTTTCC TTTGGTTTAA TTTTTGTAGA ATGGGTGTGG AAGTGTATAC GTGTCGCGAA TTGCCCTATT  TCTACTTTGT TATGTACGTA CGTCGAATTT GGCCATATTG TTTACCATTG AATAATCGCA TTGAGTGAGT GGTTGTCGAC GTGTAGTGCA ATTGCCTTAG GTAACTTTGT TATACTGAGA  ACCTAATCCT TAAGAATCGT GTCAATAGGA TAGAGGTAAA TGCTACAAGT AGGATCCGCC TTACTAAGAG AATTTAGTTT AATGTAGGAT GTGTTCTTAT TACGGCATAG GCTACCTAGC  TGAAATAATC TACAGATCCT GTTTGTACGA ATTAGCTGCT CTGCTGGTGC TGCGTCTGGA ATTGTGCACG AGTCCTGTAG AGGGACGGTT TACGAAAACT GCTTGGATGG ATGACTAATT  TTTATTTTTG TTTTTATTTC TTTTCTTGTC TCCATCTGGG TGGCTTACAT CGCTGACGGT GGATAAAGAT ACTATTAGCC TATTCGAGAT GCTTGTGTTT TGCTAACGCC CCTACGTCTC  ATTTGCTCCT CGTTTTGTTA TGGTAACATT GTTGTCACAA GCATATTGTA CTTCTATTCT AAATTATTTT TTGCTTTCTT CAGTGGCAGG AGTTGTCAAT GAAACCACAT GGAAGGAACT  TGTATTGGAA AGTGACATCC CCGTACTGGT CGACTTCTGG GCACCCTGGT GTGGCCCCTG CCGCATGATT GCCCCTCTGA TTGACGAAAT AGCGAAGGCG TATGCTGGCA AGGTGAAGTG  CTTGAAACTG AACACAGATG AGAGCCCTGG CATTGCTACA GAGTACGGCA TTCGTAGTAT TCCCACCGTC ATGGTGTTCA AGGGCGGAGA GAAGAAGGAT ACTGTCATTG GAGCTGTGCC 
CAAGTCTACA TTGACCTCAA CTCTAGAAAA GCACTTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGTGC TGGTGGAGGC AGGGGTGGTA GTTGGGTGCG CGGCCCAGCT GGCCCAGACT GTCGCCTCGT CGCTCTCGGC GTCGAGCTCC AATGCGCCCC GCGTGGTGGG CATGGGCGTG  CGCTGCCTGC CCGTCGCTCG TGGCCTCCGA ATCGACGCAT CCAGGACGAA ATTGGCGTCG CTGGGCCCTT CGCAGAGCTC CGTCCGGGCG CAGAGGAGAG GGATTGTCTG TGAAGCCCAA  GAAACTGTCA CCGGAGTGGC AGGAGTTGTC AATGAAACCA CATGGAAGGA ACTTGTATTG GAAAGTGACA TCCCCGTACT GGTCGACTTC TGGGCACCCT GGTGTGGCCC CTGCCGCATG  ATTGCCCCTC TGATTGACGA AATAGCGAAG GCGTATGCTG GCAAGGTGAA GTGCTTGAAA CTGAACACAG ATGAGAGCCC TGGCATTGCT ACAGAGTACG GCATTCGTAG TATTCCCACC 
GTCATGGTGT TCAAGGGCGG AGAGAAGAAG GATACTGTCA TTGGAGCTGT GCCCAAGTCT ACATTGACCT CAACTCTAGA AAAGCACTTG TAG 

Retrieve as FASTA