Entry information : PaPrx01
Entry ID 1423
Creation 2005-06-15 (Christophe Dunand)
Last sequence changes 2015-12-16 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: PaPrx01
Name PaPrx01
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Lauraceae Persea
Organism Persea americana (Avocado)    [TaxId: 3435 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PaPrx01
start..stop
S start..stop
PaPrx02 422 2e-151 1..228 1..228
VvPrx02 350 6e-123 1..228 1..227
AfpPrx03 347 9e-122 1..228 1..227
AcoPrx30 346 2e-121 1..228 1..227
Literature and cross-references PaPrx01
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   CO997371.1 [5' end]
Protein sequence: PaPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   228 (205)
PWM (Da):   %s   24317.36 (21939.1) Transmb domain:   %s   i5-22o
PI (pH):   %s   6.34 (6.34) Peptide Signal:   %s   cut: 24 range:24-228
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEKIGYVGVI FLGVLAFLGS VQGQLKLGFY DQTCPNAEKI VQDYVKKHIP NAPSLAAALL RMHFHDCFVR GCDASVLLNS SSTNTAEKDS PPNLTLRGFG FIETVKSLIE AECPGVVSCA 
DILSLVARDS VVTIGGPFWR VPTGRRDGTV SNSTEALLNL PSPFFNFSTL QARFASKGLN VTDLVLLSGG HTIGIAHCNP SFAxRLYNFT GRGDMDPSLD SEYAEVLK 

Retrieve as FASTA  
Remarks Partial sequence from1 EST. 3' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGA TTGGTTATGT GGGTGTCATC TTCCTTGGTG TTTTGGCCTT CTTAGGCTCT GTACAGGGTC AGTTGAAGTT AGGATTTTAT GATCAGACCT GCCCCAATGC AGAGAAGATT  GTCCAAGACT ATGTGAAGAA ACACATCCCA AATGCACCAT CTTTGGCTGC AGCGTTACTT AGAATGCACT TCCATGACTG CTTTGTGAGG GGCTGTGATG CATCTGTTCT TTTAAACTCA  TCTTCAACCA ACACAGCTGA AAAGGATTCA CCGCCGAATC TAACCCTCCG TGGCTTCGGC TTCATCGAAA CTGTAAAGAG CTTAATAGAA GCCGAGTGCC CTGGTGTAGT TTCTTGTGCA  GATATTCTTT CACTGGTTGC AAGAGATTCA GTTGTAACAA TAGGTGGACC ATTTTGGAGG GTTCCAACAG GGCGCAGAGA TGGGACAGTT TCGAATTCCA CAGAGGCATT ACTAAACCTC  CCATCTCCAT TTTTCAATTT CAGTACTCTG CAGGCACGTT TTGCAAGCAA AGGACTCAAT GTGACAGATC TGGTTCTATT ATCTGGAGGC CACACAATTG GGATTGCTCA CTGCAATCCA 
TCATTCGCCA nCCGTCTCTA CAATTTCACT GGACGAGGCG ATATGGATCC TTCCTTAGAC AGTGAATATG CCGAAGTTCT TAAG 

Retrieve as FASTA