Entry information : PaPrx02
Entry ID 1424
Creation 2005-06-15 (Christophe Dunand)
Last sequence changes 2016-02-02 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-02 (Achraf Jemmat)
Peroxidase information: PaPrx02
Name PaPrx02
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Lauraceae Persea
Organism Persea americana (Avocado)    [TaxId: 3435 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PaPrx02
start..stop
S start..stop
AfpPrx03 496 6e-179 1..325 1..325
VvPrx02 496 7e-179 1..325 1..325
AcoPrx30 495 2e-178 1..325 1..325
SpolPrx04 479 5e-172 1..325 1..328
Literature and cross-references PaPrx02
Literature dePamphilis,C et al., Generation of ESTs from early flower buds of Persea americana. Unpublished (2003)
mRNA ref. GenBank:   CV003844.1 [5' end]
EST ref. GenBank:   CV000709.1 [3' end]
Protein sequence: PaPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35349.15 (32959.9) Transmb domain:   %s   i5-22o
PI (pH):   %s   8.56 (8.56) Peptide Signal:   %s   cut: 24 range:24-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGTMGLVAII FLGVLAFLGS VQGQLELGFY DKSCPKAEKI VLDYVKKHIP NAPSLAAALL RMHFHDCFVR GCDASLLLNS TSTNTAEKDS PPNLTVRGFG FIDGVKSLLE KECPGIVSCA  DVVSLVARDS VVTIGGPFWR VPTGRRDGTV SNSTEALQNM PAPAFNFSTL QTRFASKGLN VTDLVLLSGG HTIGIAHCNP SFTNRLYNFT GKGDMDPSLD SEYAQVLKKK CKVPTDNTTI 
FEMDPGSFRT FDLSYYRLLL KRRGLFQSDA ALTTVSTAKS IINDLLNAPL SKFYEEFALS MEKMGRIEVK TGTTGEIRKK CAVVN* 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAACAA TGGGTCTTGT GGCTATCATC TTTCTTGGTG TTTTGGCCTT CTTGGGCTCT GTTCAGGGTC AGCTGGAGTT GGGATTTTAT GATAAATCCT GCCCCAAGGC TGAGAAGATT  GTCCTAGACT ATGTGAAGAA ACACATCCCA AATGCACCAT CTTTGGCCGC AGCGCTTCTT AGAATGCACT TCCATGACTG CTTTGTGAGG GGCTGTGATG CATCTCTTCT CTTAAATTCA  ACTTCAACCA ACACAGCTGA AAAGGATTCT CCACCGAATC TAACCGTCCG TGGCTTCGGC TTCATCGATG GAGTTAAGAG TTTACTAGAA AAGGAGTGCC CTGGAATTGT TTCATGTGCG  GATGTTGTCT CACTGGTTGC AAGAGATTCA GTTGTGACAA TAGGGGGACC ATTTTGGAGG GTTCCAACAG GGCGCAGAGA TGGCACTGTG TCGAATTCCA CAGAGGCCTT GCAAAACATG  CCAGCTCCTG CTTTCAATTT CAGCACTCTG CAGACAAGAT TTGCAAGCAA AGGACTCAAT GTGACAGATC TGGTTCTGTT ATCTGGAGGC CACACAATTG GAATTGCTCA CTGCAATCCA  TCGTTCACAA ACCGTCTGTA CAATTTCACT GGAAAAGGCG ATATGGATCC ATCTCTGGAC AGTGAATACG CCCAAGTACT AAAGAAAAAG TGCAAGGTTC CAACCGATAA CACCACGATT  TTCGAAATGG ATCCTGGGAG TTTCAGGACA TTCGACCTCA GCTACTACAG GCTTTTACTA AAGAGGCGAG GCCTGTTCCA ATCTGATGCT GCTCTTACTA CAGTTAGCAC TGCAAAATCG  ATTATAAATG ACCTTCTGAA TGCGCCATTG TCGAAATTCT ATGAAGAGTT TGCTTTGTCC ATGGAGAAGA TGGGAAGAAT TGAAGTGAAG ACTGGAACAA CCGGTGAGAT AAGGAAGAAA 
TGTGCAGTGG TGAACTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGAGATAAC AGAGAAGTGA GAGAGGTTTC CTTCAnTTTC ATTGACAATG GGAACAATGG GTCTTGTGGC TATCATCTTT CTTGGTGTTT TGGCCTTCTT GGGCTCTGTT CAGGGTCAGC  TGGAGTTGGG ATTTTATGAT AAATCCTGCC CCAAGGCTGA GAAGATTGTC CTAGACTATG TGAAGAAACA CATCCCAAAT GCACCATCTT TGGCCGCAGC GCTTCTTAGA ATGCACTTCC  ATGACTGCTT TGTGAGGGGC TGTGATGCAT CTCTTCTCTT AAATTCAACT TCAACCAACA CAGCTGAAAA GGATTCTCCA CCGAATCTAA CCGTCCGTGG CTTCGGCTTC ATCGATGGAG  TTAAGAGTTT ACTAGAAAAG GAGTGCCCTG GAATTGTTTC ATGTGCGGAT GTTGTCTCAC TGGTTGCAAG AGATTCAGTT GTGACAATAG GGGGACCATT TTGGAGGGTT CCAACAGGGC  GCAGAGATGG CACTGTGTCG AATTCCACAG AGGCCTTGCA AAACATGCCA GCTCCTGCTT TCAATTTCAG CACTCTGCAG ACAAGATTTG CAAGCAAAGG ACTCAATGTG ACAGATCTGG  TTCTGTTATC TGGAGGCCAC ACAATTGGAA TTGCTCACTG CAATCCATCG TTCACAAACC GTCTGTACAA TTTCACTGGA AAAGGCGATA TGGATCCATC TCTGGACAGT GAATACGCCC  AAGTACTAAA GAAAAAGTGC AAGGTTCCAA CCGATAACAC CACGATTTTC GAAATGGATC CTGGGAGTTT CAGGACATTC GACCTCAGCT ACTACAGGCT TTTACTAAAG AGGCGAGGCC  TGTTCCAATC TGATGCTGCT CTTACTACAG TTAGCACTGC AAAATCGATT ATAAATGACC TTCTGAATGC GCCATTGTCG AAATTCTATG AAGAGTTTGC TTTGTCCATG GAGAAGATGG  GAAGAATTGA AGTGAAGACT GGAACAACCG GTGAGATAAG GAAGAAATGT GCAGTGGTGA ACTAGTAGAT TTCAGATTAT TTTCAATTAG TACCACTTGT AAGAGTTGAA TTTGTGCTAT 
TTCTGCTATG ATTGTGCTGT TCTTTCATTA GATGTAACAT TTGTGAGAAT AAAGCAGTTC AATGATTTAT TTA 

Retrieve as FASTA