Entry information : PaPrx03
Entry ID 1425
Creation 2005-06-15 (Christophe Dunand)
Last sequence changes 2016-02-02 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2016-02-02 (Achraf Jemmat)
Peroxidase information: PaPrx03
Name PaPrx03
Class Class III peroxidase     [Orthogroup: Prx037]*
Taxonomy Eukaryota Viridiplantae Streptophyta Lauraceae Persea
Organism Persea americana (Avocado)    [TaxId: 3435 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PaPrx03
start..stop
S start..stop
MePrx35 433 1e-154 6..295 27..316
PpePrx29 429 8e-153 7..295 29..318
EguPrx113 427 4e-152 7..295 27..315
LcPrx01 424 3e-151 6..295 28..317
Literature and cross-references PaPrx03
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   CO997179.1 [3' end]   CO995371.1 [Fragment]
Protein sequence: PaPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   295
PWM (Da):   %s   32009.43  
PI (pH):   %s   9.6
Sequence
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Send to Peroxiscan
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GHSHLDYYSS KCPKALSTVK AVVVAAVKKE ARMGASLLRL HFHDCFVNGC DGSILLDDNS TFTGEKTAIP NNGSVRGFEV VDDIKEAVEK VCPGVVSCAD ILALAARDST VFLGGPSWKV  PLGRRDSTTA NLTAANNDIP PPTSNLSALI SSFANQGLSV KDLVSLSGSH TIGLARCTSF RSRIYNDTNI DSTFAAKLQK KCPRVGRNNS LSRLDIATPK HFDNCYYRNL LNEKGLLHSD 
QELTNTSSTL SRVKKYVNDP STFFKDFAKS IVKMGRINPL TGSKGEIRIN CRKVN* 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCACTCTC ACCTAGATTA TTATTCGTCC AAGTGCCCGA AGGCCCTTTC GACGGTGAAG GCCGTGGTGG TGGCGGCTGT GAAGAAGGAA GCTCGAATGG GTGCCTCCTT ACTTCGACTG  CACTTCCATG ACTGCTTTGT TAATGGCTGC GATGGTTCGA TCCTGCTAGA TGACAACTCG ACTTTTACTG GGGAGAAAAC AGCTATACCA AACAACGGTT CCGTTCGGGG TTTCGAAGTA  GTGGACGACA TAAAAGAGGC GGTGGAGAAG GTTTGCCCTG GAGTCGTCTC ATGTGCTGAT ATTCTCGCTC TTGCTGCTCG TGACTCGACT GTTTTTTTGG GTGGACCATC ATGGAAAGTT  CCATTAGGAA GGAGAGATTC CACTACGGCC AACTTAACAG CTGCCAACAA TGATATTCCC CCTCCCACTT CAAATCTAAG CGCGCTTATA TCGAGTTTTG CAAATCAAGG TCTCTCTGTC  AAAGACCTAG TCTCTCTTTC AGGATCCCAC ACTATAGGAC TAGCGAGATG CACATCTTTC AGAAGCCGCA TCTACAACGA CACCAACATA GACTCCACTT TCGCGGCCAA GCTGCAAAAG  AAGTGTCCGA GAGTTGGTAG GAACAATTCA CTCTCTCGTC TGGACATCGC CACCCCTAAG CATTTCGACA ATTGCTACTA CAGGAACTTG CTAAATGAAA AGGGTCTTCT ACATTCAGAT  CAAGAGCTCA CAAATACATC TTCTACTCTT TCTCGCGTTA AAAAGTACGT TAATGACCCT TCAACCTTCT TTAAGGACTT CGCAAAGTCC ATCGTGAAAA TGGGGAGGAT CAATCCCCTC 
ACAGGAAGCA AGGGAGAGAT CAGAATCAAT TGTAGAAAGG TCAACTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCACTCTC ACCTAGATTA TTATTCGTCC AAGTGCCCGA AGGCCCTTTC GACGGTGAAG GCCGTGGTGG TGGCGGCTGT GAAGAAGGAA GCTCGAATGG GTGCCTCCTT ACTTCGACTG  CACTTCCATG ACTGCTTTGT TAATGGCTGC GATGGTTCGA TCCTGCTAGA TGACAACTCG ACTTTTACTG GGGAGAAAAC AGCTATACCA AACAACGGTT CCGTTCGGGG TTTCGAAGTA  GTGGACGACA TAAAAGAGGC GGTGGAGAAG GTTTGCCCTG GAGTCGTCTC ATGTGCTGAT ATTCTCGCTC TTGCTGCTCG TGACTCGACT GTTTTTTTGG GTGGACCATC ATGGAAAGTT  CCATTAGGAA GGAGAGATTC CACTACGGCC AACTTAACAG CTGCCAACAA TGATATTCCC CCTCCCACTT CAAATCTAAG CGCGCTTATA TCGAGTTTTG CAAATCAAGG TCTCTCTGTC  AAAGACCTAG TCTCTCTTTC AGGATCCCAC ACTATAGGAC TAGCGAGATG CACATCTTTC AGAAGCCGCA TCTACAACGA CACCAACATA GACTCCACTT TCGCGGCCAA GCTGCAAAAG  AAGTGTCCGA GAGTTGGTAG GAACAATTCA CTCTCTCGTC TGGACATCGC CACCCCTAAG CATTTCGACA ATTGCTACTA CAGGAACTTG CTAAATGAAA AGGGTCTTCT ACATTCAGAT  CAAGAGCTCA CAAATACATC TTCTACTCTT TCTCGCGTTA AAAAGTACGT TAATGACCCT TCAACCTTCT TTAAGGACTT CGCAAAGTCC ATCGTGAAAA TGGGGAGGAT CAATCCCCTC  ACAGGAAGCA AGGGAGAGAT CAGAATCAAT TGTAGAAAGG TCAACTGATA TATATATATA TATATATATA AAAATTTATA TATGAGATGT GTTCATACGT ATAATATACA TGTTTATTGT  TGCATGTGTT GTACTTCTTC CATGTATTGG GACATATCAC AGGTTAGAGC TAATGAATTC TGCTCTTATT GTGGTTTATC ACTTTACTGT GATTTAATGA TAAACATTTG ATTGTCATGG 
TCAAAACATT CAGATTAATT TACAAAAAAA AAAAAAAAA 

Retrieve as FASTA