Entry information : AhalPrxQ01 (Araha.9743s0006)
Entry ID 14295
Creation 2016-12-27 (Qiang Li)
Last sequence changes 2018-03-08 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-03-08 (Christophe Dunand)
Peroxidase information: AhalPrxQ01 (Araha.9743s0006)
Name (synonym) AhalPrxQ01 (Araha.9743s0006)
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrxQ01
start..stop
S start..stop
AlyPrxQ 363 1e-130 1..177 40..216
AtPrxQ 360 3e-129 1..177 40..216
ThasPrxQ01 299 4e-105 1..177 42..216
AdePrxQ 295 1e-103 1..173 37..210
Literature and cross-references AhalPrxQ01 (Araha.9743s0006)
Protein sequence: AhalPrxQ01 (Araha.9743s0006)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   177
PWM (Da):   %s   19498.11  
PI (pH):   %s   9.92
Sequence
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Send to Peroxiscan
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SNFFGSRLTH SSYLSPVSSS SLKSLIFAKV NKGQAAPDFT LKDQNGKPVS LKKYKGKPVV LYFYPADETP GCTKQACAFR DSYEKFKKAG AEVIGISGDD SASHKAFASK YKLPYTLLSD 
EGNKVRKDWG VPGDLFGALP GRQTYVLDKN GVVQLIYNNQ FQPEKHIDET LKFLKAA* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing due to N in the sequence.
DNA
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TCTAATTTCT TTGGCTCCAG ACTCACTCAC TCGTCGTATC TCTCCCCAGT CTCTTCCTCT TCTCTCAAAA GCTTAATCTT TGCCAAGGTA CATTTCACGA ATCTTGCATT GATAGATTGT  TTGCTACAAT TGGGTAACAA CTAGTTCTGG GAATTAGCTT CTTTGTTAGA CCAATCTTGT TTGGACAATT TAAGTTGTGT TCCTTAGACA ACTTCTGTAG TAATCTCTGC CAACTTTTTC  TTATATGTTT TTTGCCTTCG ATCCCAAGAT ATACATGGAA AAATTGAGTA TTTTGGGTCT GAATTTGAAT GTTATGATGA TAGACAAAAT CAGCAAAACC ATATCAAAGA AAATTGTAAT  CAGTGTTTGT TTAAGAGACC ATAAACTTTC ACATACCACC TAATAAGAAA ATGCTAGAAT GCTCTTGAAT AATGCAATCC TCTATTAGAT TATCTCTGAA CTCTCTTTAA CCTTTTTTGA  ATTGTTCTCT ATTGTGATGT TTGGTGGACA ACAGGTTAAC AAGGGTCAGG CTGCACCAGA CTTCACATTG AAGGATCAGA ACGGAAAGCC GGTGAGCCTC AAGAAGTATA AAGGGAAGCC  TGTTGTTCTC TACTTCTACC CTGCAGATGA AACCCCTGGC TGCACCAAAC AGGTCTTTAA TTTTTACTCT CTTCTCTTTT CCGCATTCAT CCCGCGTATT TAGTATTGTT ACAACGTAAA  TGGTTTCACT TTTATACGAC AGGCTTGTGC TTTTAGAGAC TCTTATGAGA AATTCAAGAA AGCCGGTGCA GAGGTCATTG GGATTAGTGG TGATGACTCT GCTTCTCACA AGGTACACAC  ACATCATAAG CTGATTTCTG AATAAAAAAC CAATGTTGTT TTACGGGTTT TAAAGAGGGT TTGGGACTTT AAACATTGTT GCAGGCGTTT GCAAGCAAAT ACAAACTCCC GTATACATTG  TTAAGCGACG AAGGGAATAA GGTGAGAAAA GATTGGGGAG TACCAGGAGA CTTGTTTGGG GCATTGCCAG GGAGACAAAC TTACGTCCTT GACAAAAACG GTGTTGTTCA GCTCATCTAC 
AACAACCAGT TCCAGCCTGA GAAACACATT GACGAGACCT TGAAGTTTCT CAAAGCTGCT TGA 

Retrieve as FASTA  
CDS
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TCTAATTTCT TTGGCTCCAG ACTCACTCAC TCGTCGTATC TCTCCCCAGT CTCTTCCTCT TCTCTCAAAA GCTTAATCTT TGCCAAGGTT AACAAGGGTC AGGCTGCACC AGACTTCACA  TTGAAGGATC AGAACGGAAA GCCGGTGAGC CTCAAGAAGT ATAAAGGGAA GCCTGTTGTT CTCTACTTCT ACCCTGCAGA TGAAACCCCT GGCTGCACCA AACAGGCTTG TGCTTTTAGA  GACTCTTATG AGAAATTCAA GAAAGCCGGT GCAGAGGTCA TTGGGATTAG TGGTGATGAC TCTGCTTCTC ACAAGGCGTT TGCAAGCAAA TACAAACTCC CGTATACATT GTTAAGCGAC  GAAGGGAATA AGGTGAGAAA AGATTGGGGA GTACCAGGAG ACTTGTTTGG GGCATTGCCA GGGAGACAAA CTTACGTCCT TGACAAAAAC GGTGTTGTTC AGCTCATCTA CAACAACCAG 
TTCCAGCCTG AGAAACACAT TGACGAGACC TTGAAGTTTC TCAAAGCTGC TTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCTAATTTCT TTGGCTCCAG ACTCACTCAC TCGTCGTATC TCTCCCCAGT CTCTTCCTCT TCTCTCAAAA GCTTAATCTT TGCCAAGGTT AACAAGGGTC AGGCTGCACC AGACTTCACA  TTGAAGGATC AGAACGGAAA GCCGGTGAGC CTCAAGAAGT ATAAAGGGAA GCCTGTTGTT CTCTACTTCT ACCCTGCAGA TGAAACCCCT GGCTGCACCA AACAGGCTTG TGCTTTTAGA  GACTCTTATG AGAAATTCAA GAAAGCCGGT GCAGAGGTCA TTGGGATTAG TGGTGATGAC TCTGCTTCTC ACAAGGCGTT TGCAAGCAAA TACAAACTCC CGTATACATT GTTAAGCGAC  GAAGGGAATA AGGTGAGAAA AGATTGGGGA GTACCAGGAG ACTTGTTTGG GGCATTGCCA GGGAGACAAA CTTACGTCCT TGACAAAAAC GGTGTTGTTC AGCTCATCTA CAACAACCAG 
TTCCAGCCTG AGAAACACAT TGACGAGACC TTGAAGTTTC TCAAAGCTGC TTGA 

Retrieve as FASTA