Entry information : BnPrx36-1C_other
Entry ID 14339
Creation 2017-04-11 (Christophe Dunand)
Last sequence changes 2017-04-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-24 (Christophe Dunand)
Peroxidase information: BnPrx36-1C_other
Name BnPrx36-1C_other
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Seed coats
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx36-1C_other
start..stop
S start..stop
BoPrx36_other 699 0 1..337 1..337
BrPrx36-1Aa_other 672 0 1..337 1..337
BnPrx36-1A_other 632 0 1..320 1..320
TsPrx36 590 0 1..337 1..337
Literature and cross-references BnPrx36-1C_other
EST ref. GenBank:   FG561504.1 [5' end]   EV070233.1 [3' end]
Protein sequence: BnPrx36-1C_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (313)
PWM (Da):   %s   37259.36 (34618.0)  
PI (pH):   %s   5.97 (5.42) Peptide Signal:   %s   cut: 25 range:25-337
Sequence
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Send to Peroxiscan
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MAKPVMCIVL TQIVLVALFH LCMSSQTKEC TSTSSLSPQF YDNSCPKAQA IVQSFVAKAH SNDPRMAASL FRLHFHDCFV NGCDGSLLLD YSGTIESEKR ADTNVDSARG FEVIGDIKSA  LEDECRQTVS CADILALVAR DTTVITGGPS WEVYLGRRDA REASLIASNN NIPVASSTFE TIVTKFNDQG LGLIDLVALL GRHTIGNSRC KSFRQRLYNH SGNSDLDQTL NQNYASMLQQ 
GCPISGDDQN LFALDYMTPN KFDNYYFKNL MTFKGLLSSD EILYTKSGDS MELVKLYGAN EELFFEQYAK SKVEMGNISP LTGRNGEIRR ICRRVNH 

Retrieve as FASTA  
Remarks
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGC CAGTAATGTG CATTGTTCTC ACTCAAATCG TCCTCGTTGC CTTATTTCAT CTTTGTATGA GTTCTCAAAC CAAAGAATGC ACGAGCACAT CCTCCCTCTC CCCTCAGTTT  TACGACAACT CGTGCCCTAA AGCCCAAGCC ATTGTCCAAT CTTTCGTCGC CAAAGCACAC TCCAACGACC CTCGCATGGC AGCCTCATTG TTTAGGCTTC ATTTCCATGA CTGCTTCGTC  AATGGATGTG ATGGTTCTTT ATTATTAGAC TATAGTGGAA CCATAGAAAG CGAGAAACGA GCAGACACAA ACGTAGACTC TGCCCGAGGG TTTGAAGTCA TCGGCGATAT TAAGTCTGCC  TTGGAAGATG AGTGTCGCCA AACAGTTTCT TGCGCTGATA TTTTGGCTCT CGTTGCTAGA GACACTACTG TTATTACTGG TGGCCCGAGT TGGGAAGTAT ATTTAGGAAG AAGAGATGCA  AGGGAAGCAA GCTTGATTGC TTCTAACAAC AATATTCCTG TTGCCAGCTC TACGTTTGAG ACAATTGTCA CCAAGTTCAA CGACCAAGGA CTCGGTCTTA TCGATCTTGT TGCTCTCTTA  GGACGTCATA CGATAGGAAA TTCGAGGTGC AAGAGCTTCC GACAAAGGCT ATACAACCAT TCTGGAAACA GCGATCTCGA CCAGACTTTG AATCAAAACT ACGCCTCAAT GTTGCAGCAG  GGATGTCCTA TTTCTGGTGA CGACCAGAAC CTCTTTGCTC TCGACTATAT GACGCCAAAT AAGTTTGATA ACTACTACTT CAAGAATCTG ATGACTTTTA AAGGACTCTT GAGCTCTGAT  GAGATTTTGT ACACAAAGAG TGGAGACTCC ATGGAGCTGG TCAAGCTTTA CGGGGCTAAT GAGGAATTGT TCTTTGAGCA GTACGCAAAG TCAAAGGTGG AGATGGGAAA CATCTCGCCG 
TTGACGGGGA GAAATGGTGA GATCCGGAGG ATCTGTAGGA GAGTTAACCA TTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAATAATCAC TAGTCCCAAA AACTCGAAAA AGAATCAAAT GGCAAAGCCA GTAATGTGCA TTGTTCTCAC TCAAATCGTC CTCGTTGCCT TATTTCATCT TTGTATGAGT TCTCAAACCA  AAGAATGCAC GAGCACATCC TCCCTCTCCC CTCAGTTTTA CGACAACTCG TGCCCTAAAG CCCAAGCCAT TGTCCAATCT TTCGTCGCCA AAGCACACTC CAACGACCCT CGCATGGCAG  CCTCATTGTT TAGGCTTCAT TTCCATGACT GCTTCGTCAA TGGATGTGAT GGTTCTTTAT TATTAGACTA TAGTGGAACC ATAGAAAGCG AGAAACGAGC AGACACAAAC GTAGACTCTG  CCCGAGGGTT TGAAGTCATC GGCGATATTA AGTCTGCCTT GGAAGATGAG TGTCGCCAAA CAGTTTCTTG CGCTGATATT TTGGCTCTCG TTGCTAGAGA CACTACTGTT ATTACTGGTG  GCCCGAGTTG GGAAGTATAT TTAGGAAGAA GAGATGCAAG GGAAGCAAGC TTGATTGCTT CTAACAACAA TATTCCTGTT GCCAGCTCTA CGTTTGAGAC AATTGTCACC AAGTTCAACG  ACCAAGGACT CGGTCTTATC GATCTTGTTG CTCTCTTAGG ACGTCATACG ATAGGAAATT CGAGGTGCAA GAGCTTCCGA CAAAGGCTAT ACAACCATTC TGGAAACAGC GATCTCGACC  AGACTTTGAA TCAAAACTAC GCCTCAATGT TGCAGCAGGG ATGTCCTATT TCTGGTGACG ACCAGAACCT CTTTGCTCTC GACTATATGA CGCCAAATAA GTTTGATAAC TACTACTTCA  AGAATCTGAT GACTTTTAAA GGACTCTTGA GCTCTGATGA GATTTTGTAC ACAAAGAGTG GAGACTCCAT GGAGCTGGTC AAGCTTTACG GGGCTAATGA GGAATTGTTC TTTGAGCAGT  ACGCAAAGTC AAAGGTGGAG ATGGGAAACA TCTCGCCGTT GACGGGGAGA AATGGTGAGA TCCGGAGGAT CTGTAGGAGA GTTAACCATT GAAATGTCTA ATTAAGTTTC ATTACTAGAT 
ACTTAGGGCA TATGGGTTTG ATATGATTAA CGTTTTCTTG ATATGTGTAG AGGTTGATTT CTTTTGAATA TGTTTTAATT GATGAGTTTG GTGTGTTA 

Retrieve as FASTA