Entry information : LtPrx05
Entry ID 1437
Creation 2005-09-28 (Christophe Dunand)
Last sequence changes 2015-12-17 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: LtPrx05
Name LtPrx05
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Magnoliaceae Liriodendron
Organism Liriodendron tulipifera    [TaxId: 3415 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LtPrx05
start..stop
S start..stop
AtrPrx17 292 5e-100 17..214 16..214
GmPrx314 290 7e-99 4..214 1..218
RaPrx02 284 2e-98 3..214 2..213
AtrPrx04 286 2e-97 7..214 8..214
Literature and cross-references LtPrx05
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   DT595171.1 [Fragment]
Protein sequence: LtPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   214 (186)
PWM (Da):   %s   23064.92 (19959.3)  
PI (pH):   %s   7.09 (7.37) Peptide Signal:   %s   cut: 29 range:29-214
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LEAMASLSLL NFLFHSILFL SSFSHAQTTP PLVEGLSLTF YRSSCSNLEK IIRDELRKVY QKDITQAAGV LRIHFHDCFV QGCDASLLLD GSASGPGEKE APPNLTLRPE AFKIINNLRV 
AIEKSCRRVV SCSDIVALGA RDSIFLAGGP DYKVPLGRRD GLSFATREAT LANLLGPTST PTELIDAFRN RSMDATDLVA LSGTHTIGIS HCSS 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTAGAAGCAA TGGCTTCCTT GTCTCTCCTC AACTTCCTCT TCCACTCTAT CCTTTTCCTA TCATCCTTCT CACATGCCCA AACCACTCCT CCTTTGGTCG AAGGACTCTC ACTCACTTTC  TACAGATCCA GCTGCTCGAA CTTAGAAAAA ATTATCCGAG ATGAGCTCCG GAAGGTGTAC CAAAAGGACA TCACCCAGGC TGCTGGTGTG CTTCGGATCC ACTTCCACGA CTGCTTCGTG  CAGGGGTGTG ATGCATCACT ATTGCTGGAC GGGTCTGCAA GTGGACCAGG TGAGAAGGAG GCACCTCCAA ACCTGACATT GAGGCCGGAA GCTTTTAAGA TAATCAACAA CCTACGTGTT  GCTATTGAGA AGAGTTGCCG CCGGGTTGTT TCCTGCTCCG ACATCGTCGC TCTTGGTGCC CGCGACTCCA TTTTCCTGGC AGGTGGTCCT GACTACAAGG TTCCTTTGGG CAGGCGCGAT  GGCCTGAGCT TTGCCACCAG AGAAGCAACG CTGGCGAACC TCCTGGGTCC CACCAGCACT CCCACAGAAC TTATCGATGC ATTCCGCAAC AGGAGCATGG ATGCGACAGA CCTGGTCGCA 
CTCTCTGGGA CCCACACGAT CGGGATCAGC CATTGCTCCT CG 

Retrieve as FASTA