Entry information : LtPrx06
Entry ID 1438
Creation 2005-09-28 (Christophe Dunand)
Last sequence changes 2015-12-17 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: LtPrx06
Name LtPrx06
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Magnoliaceae Liriodendron
Organism Liriodendron tulipifera    [TaxId: 3415 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LtPrx06
start..stop
S start..stop
RaPrx02 290 4e-101 2..189 1..194
LjPrx02 289 4e-99 4..188 7..193
FvPrx01 289 6e-99 5..189 11..198
PePrx02 283 5e-98 14..189 22..197
Literature and cross-references LtPrx06
Literature dePamphilis,C. et al., unpublished
EST ref. GenBank:   DT600425.1 [Fragment]
Protein sequence: LtPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191 (171)
PWM (Da):   %s   20463.71 (18340.6)  
PI (pH):   %s   9.74 (9.74) Peptide Signal:   %s   cut: 21 range:21-191
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
QMTVLLLVLS SLAFFSSSQA QSSPPLVKGL SWTFYKSNCP KLETIVRDQL RKAFKKDIGQ AAGLLRVHFH DCFVQGCDGS VLLDGSASGP SEKDAPPNLT LRPEAFTIIN DLRARVEKRC 
GRVVSCSDIV ALAARDSVFL SGGPDYRVPL GRRDGLSFAT RNATLNNLPA PSSGTTVLLN ALSRKNLDAQ I 

Retrieve as FASTA  
Remarks Partial sequence from 1EST
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGATGACTG TCCTCCTGCT TGTACTGTCC TCATTGGCTT TCTTCTCATC CTCTCAGGCC CAAAGCAGTC CTCCACTAGT GAAGGGACTG TCTTGGACTT TCTACAAATC CAACTGCCCT  AAGCTGGAAA CCATTGTCCG GGATCAGCTT CGGAAAGCCT TCAAGAAGGA CATCGGCCAA GCTGCAGGCT TGCTGCGAGT GCACTTCCAC GACTGCTTTG TTCAGGGTTG TGATGGATCG  GTATTGTTAG ATGGTTCGGC GAGCGGACCG AGTGAGAAGG ATGCGCCTCC CAACCTGACG CTGAGACCTG AGGCCTTCAC TATTATAAAT GACCTTCGCG CTCGTGTAGA GAAACGATGC  GGCCGTGTCG TCTCCTGCTC CGACATTGTT GCTCTTGCTG CTCGGGACTC TGTTTTCTTG TCAGGTGGCC CGGACTACCG GGTCCCGCTA GGTAGGCGTG ATGGCCTGAG TTTTGCCACA 
AGAAATGCAA CACTAAACAA CCTCCCAGCC CCCTCCTCTG GCACGACCGT CCTTCTCAAT GCACTGAGCA GAAAGAACCT AGATGCACAG ATC 

Retrieve as FASTA