Entry information : CatmPrx01_M2923
Entry ID 14382
Creation 2017-10-17 (Christophe Dunand)
Last sequence changes 2017-10-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-10 (Christophe Dunand)
Peroxidase information: CatmPrx01_M2923
Name CatmPrx01_M2923
Class Class III peroxidase    [Orthogroup: Prx191]
Taxonomy Eukaryota Viridiplantae Streptophyta Chlorokybophyceae Chlorokybaceae Chlorokybus
Organism Chlorokybus atmophyticus     [TaxId: 3144 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CatmPrx01_M2923
start..stop
S start..stop
CatmPrx[P]02 223 2e-72 58..329 1..253
PmargPrx02 220 3e-70 6..329 1..324
ApuncPrx04 219 3e-69 6..329 53..371
ScucPrx31 218 4e-69 36..329 52..344
Literature and cross-references CatmPrx01_M2923
Protein sequence: CatmPrx01_M2923
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (308)
PWM (Da):   %s   35487.3 (33444.2) Transmb domain:   %s   o4-26i
PI (pH):   %s   8.16 (8.16) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
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MASAVVVLLL LLSSFASQAA AASLTYKHYL KRQHYCPQFP CIVADVIKEA TRRDRIAAPG LLRAFFHDCF VRGCDASLLL DPVAGQPPNE KQSIFNLSIR RLELVDEIKT RLEQACPGKV  SCADILAQAA VEAVHRVGGP KISLRMGRLD GNVSLADDVL RFLPSPFFNT DQLIATFEAV GLGADDVVPL SGGHTFGETH CVAVRPRLDA PGGDPALTPS HAAFLEQTFP DPTCGGGNPF 
APGGPAVNLD NITSDRFDGG YFKGIRNGRT AMRSDAALLE GQLKDQVLLY ARDRAAFFTN FTRSLRRMSK LGVKLGEEGE IRTNCRRVN 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq: (scaffold-AZZW-2019415-Chlorokybus_atmophyticus) and genomic (Chlatm_Chrsp64S09153: incorrect prediction of exon 2 due to n in the sequence)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTCTG CTGTGGTGGT ATTACTGCTG TTGTTGTCCT CCTTTGCATC GCAGGCAGCG GCGGCCTCCC TGACATACAA ACACTACCTG AAGAGGCAGC ACTATTGCCC TCAGTTCCCA  TGCATTGTTG CGGACGTGAT CAAGGAGGCA ACCAGAAGGG TGAGTTGAAG CGTGGGTTGA AGTGTTGTAA GTCTCTCATG CATGCACATA CTTGGTTGTA TGGTAAGTTG ACTATGTGAT  AGGACCGTAT TGCTGCGCCG GGGCTGCTCA GAGCCTTCTT CCATGACTGC TTCGTACGCG GGTGCGATGC ATCCCTCCTG CTGGACCCCG TGGCGGGTAA TATTCGAGCT TAAAATACGC  ATTGTGCACA TCTAACAGGC TCTGTATGCA ATCATTGCCA TTTAGGTGCT TGAGGCCAAT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC  TGCTTGCAGG CCAGCCACCA AATGAGAAGC AGTCCATTTT CAATCTCAGC ATCCGGAGGC TGGAGTTGGT GGATGAGATA AAGACCCGAC TAGAGCAGGT ACCCACATTG CACCCGCACA  CACCCACAGC ATGCACTACA CACCGCATGC ACGAACTCAA CATACCCACA CACCCTCTCT CTGTTGCCTT ACAGGCTTGT CCAGGGAAGG TCTCCTGTGC GGATATCCTA GCGCAGGCTG  CTGTTGAGGC TGTACACAGA GTGGGTGGCC CGAAGATATC GCTGCGAATG GGTCGGCTTG ACGGCAACGT ATCCCTTGCG GACGACGTGC TGCGCTTCCT CCCTTCGCCT TTTTTCAACA  CCGACCAACT CATCGCCACC TTTGAGGCTG TTGGACTGGG GGCTGACGAT GTTGTGCCTC TTAGTGGCGG GCACACCTTT GGAGAAGTGA GTCAGTATGT GTCTTGTTGG TGACTATGTT  CATGTGCGCG GTTGTCTGCC TTGGTTACAT GTGAGGCACG AGACAACTTT TGTGTTGAGC ATATGCATGG TGTTATATTG CTGACTCAGT ACAAGTCAAA CAAGAAGTAC TTGTGGCTTA  AGTATTTGTC CATGTCAATC CTCACATCCC ATGCGTGTGG TTATAGACAC ATTGCGTAGC GGTGAGGCCT AGGTTGGACG CTCCAGGCGG GGACCCGGCA TTGACCCCGA GTCACGCCGC  TTTCTTGGAG CAGACGTTCC CGGACCCAAC ATGCGGCGGC GGGAACCCGT TTGCGCCAGG GGGCCCAGCT GTAAACCTTG ACAACATCAC AAGCGACCGG TTTGATGGGG GCTACTTCAA  GGGCATACGC AACGGCCGCA CAGCAATGCG CTCGGATGCG GCATTGCTCG AAGGACAGTT GAAAGACCAG GTGACTTCTG CGTAATGTAA TGTGCAATGG TTTACTTCTG TCTACGGTGC  TTAACTTGGT TTGTTGGTAG GTGCTGTTGT ACGCGCGTGA CCGAGCTGCC TTTTTCACCA ATTTCACCAG ATCCTTGCGG CGTATGAGCA AGCTGGGGGT GAAGCTTGGG GAAGAGGGTG 
AGATTCGCAC CAACTGCAGG AGGGTGAAC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTCTG CTGTGGTGGT ATTACTGCTG TTGTTGTCCT CCTTTGCATC GCAGGCAGCG GCGGCCTCCC TGACATACAA ACACTACCTG AAGAGGCAGC ACTATTGCCC TCAGTTCCCA  TGCATTGTTG CGGACGTGAT CAAGGAGGCA ACCAGAAGGG ACCGTATTGC TGCGCCGGGG CTGCTCAGAG CCTTCTTCCA TGACTGCTTC GTACGCGGGT GCGATGCATC CCTCCTGCTG  GACCCCGTGG CGGGCCAGCC ACCAAATGAG AAGCAGTCCA TTTTCAATCT CAGCATCCGG AGGCTGGAGT TGGTGGATGA GATAAAGACC CGACTAGAGC AGGCTTGTCC AGGGAAGGTC  TCCTGTGCGG ATATCCTAGC GCAGGCTGCT GTTGAGGCTG TACACAGAGT GGGTGGCCCG AAGATATCGC TGCGAATGGG TCGGCTTGAC GGCAACGTAT CCCTTGCGGA CGACGTGCTG  CGCTTCCTCC CTTCGCCTTT TTTCAACACC GACCAACTCA TCGCCACCTT TGAGGCTGTT GGACTGGGGG CTGACGATGT TGTGCCTCTT AGTGGCGGGC ACACCTTTGG AGAAACACAT  TGCGTAGCGG TGAGGCCTAG GTTGGACGCT CCAGGCGGGG ACCCGGCATT GACCCCGAGT CACGCCGCTT TCTTGGAGCA GACGTTCCCG GACCCAACAT GCGGCGGCGG GAACCCGTTT  GCGCCAGGGG GCCCAGCTGT AAACCTTGAC AACATCACAA GCGACCGGTT TGATGGGGGC TACTTCAAGG GCATACGCAA CGGCCGCACA GCAATGCGCT CGGATGCGGC ATTGCTCGAA  GGACAGTTGA AAGACCAGGT GCTGTTGTAC GCGCGTGACC GAGCTGCCTT TTTCACCAAT TTCACCAGAT CCTTGCGGCG TATGAGCAAG CTGGGGGTGA AGCTTGGGGA AGAGGGTGAG 
ATTCGCACCA ACTGCAGGAG GGTGAACTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTACTCCATT GTTGCCTTTT TCAACATGGC CTCTGCTGTG GTGGTATTAC TGCTGTTGTT GTCCTCCTTT GCATCGCAGG CAGCGGCGGC CTCCCTGACA TACAAACACT ACCTGAAGAG  GCAGCACTAT TGCCCTCAGT TCCCATGCAT TGTTGCGGAC GTGATCAAGG AGGCAACCAG AAGGGACCGT ATTGCTGCGC CGGGGCTGCT CAGAGCCTTC TTCCATGACT GCTTCGTACG  CGGGTGCGAT GCATCCCTCC TGCTGGACCC CGTGGCGGGC CAGCCACCAA ATGAGAAGCA GTCCATTTTC AATCTCAGCA TCCGGAGGCT GGAGTTGGTG GATGAGATAA AGACCCGACT  AGAGCAGGCT TGTCCAGGGA AGGTCTCCTG TGCGGATATC CTAGCGCAGG CTGCTGTTGA GGCTGTACAC AGAGTGGGTG GCCCGAAGAT ATCGCTGCGA ATGGGTCGGC TTGACGGCAA  CGTATCCCTT GCGGACGACG TGCTGCGCTT CCTCCCTTCG CCTTTTTTCA ACACCGACCA ACTCATCGCC ACCTTTGAGG CTGTTGGACT GGGGGCTGAC GATGTTGTGC CTCTTAGTGG  CGGGCACACC TTTGGAGAAA CACATTGCGT AGCGGTGAGG CCTAGGTTGG ACGCTCCAGG CGGGGACCCG GCATTGACCC CGAGTCACGC CGCTTTCTTG GAGCAGACGT TCCCGGACCC  AACATGCGGC GGCGGGAACC CGTTTGCGCC AGGGGGCCCA GCTGTAAACC TTGACAACAT CACAAGCGAC CGGTTTGATG GGGGCTACTT CAAGGGCATA CGCAACGGCC GCACAGCAAT  GCGCTCGGAT GCGGCATTGC TCGAAGGACA GTTGAAAGAC CAGGTGCTGT TGTACGCGCG TGACCGAGCT GCCTTTTTCA CCAATTTCAC CAGATCCTTG CGGCGTATGA GCAAGCTGGG  GGTGAAGCTT GGGGAAGAGG GTGAGATTCG CACCAACTGC AGGAGGGTGA ACTGAACCCG TACTGCGTAC ACACACCATT CATAACGCAT TCTCAACTTC GTTGATCAAC TGGATAGCTA 
AGCTAGCTAC GTGTTGCTGA CTGCAGACAT TAATCTTCCT ATGTGAGCCA TTGTGTGATG CATAGGTTAT GTTTACG 

Retrieve as FASTA