Entry information : CatmAPx02_M2923
Entry ID 14384
Creation 2017-10-17 (Christophe Dunand)
Last sequence changes 2017-10-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2017-10-17 (Christophe Dunand)
Peroxidase information: CatmAPx02_M2923
Name CatmAPx02_M2923
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Chlorokybophyceae Chlorokybaceae Chlorokybus
Organism Chlorokybus atmophyticus     [TaxId: 3144 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CatmAPx02_M2923
start..stop
S start..stop
CatmAPx02_UTEX2591 660 0 2..329 40..367
NtAPx02 390 2e-137 60..329 9..273
McAPx04 391 1e-136 60..329 94..358
McAPx05 392 4e-136 60..329 94..358
Literature and cross-references CatmAPx02_M2923
Protein sequence: CatmAPx02_M2923
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   36198.14  
PI (pH):   %s   6.26
Sequence
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Send to Peroxiscan
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AVLQTLSLRS SQAVASRSAL QASSKCIVPK ASRGVLHITC ETDVAATPQV DLDTKKKIYR DCKQAVEQLI KDRNCNPIMI RAGWHDAGTY NVNIEEWPQR GGTNGSLRFP IEQGHGANAG  MVVAYNLLKP INKKFPEVTW ADLFQMAGAV AIEVAGGPAI DMKYGRVDTT SDADCPESGR LPDADPKTTG RGEPAEHLRN VFYRMGLNDQ DIVALSGAHT MGRVRQDRSG FGVKETKYTK 
DGPGIKGGQS WTPEWLVFDN SYFVEVKEKR DADLVVLPTD AALFEDDGFK QYAEKYAVDQ EAFFKDYAVS HKKLSELGAK WNPEDGFSI* 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq (scaffold-AZZW-2019609-Chlorokybus_atmophyticus). Short 5' end is missing.
CDS
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GCCGTACTGC AGACTCTGTC CCTGAGGTCG TCCCAGGCCG TGGCTTCCAG GTCTGCCCTC CAGGCTAGCA GCAAGTGCAT TGTACCCAAG GCATCCCGCG GTGTCCTGCA TATTACCTGC  GAAACTGATG TTGCAGCGAC GCCTCAAGTG GACCTTGACA CCAAGAAGAA GATCTACAGG GATTGCAAGC AGGCGGTGGA GCAGCTCATC AAGGACAGGA ACTGCAACCC TATTATGATT  CGCGCAGGCT GGCATGATGC TGGCACGTAC AATGTGAACA TTGAGGAGTG GCCCCAGAGG GGTGGTACAA ATGGCAGCTT GCGATTCCCT ATTGAGCAAG GCCATGGAGC TAACGCAGGC  ATGGTTGTGG CTTACAACCT GTTGAAGCCC ATCAACAAGA AGTTCCCAGA AGTGACTTGG GCTGATCTTT TCCAAATGGC TGGCGCTGTG GCTATTGAGG TTGCGGGTGG ACCTGCCATC  GACATGAAGT ATGGGCGGGT TGACACAACT AGCGATGCTG ATTGCCCGGA GTCTGGCAGG TTGCCCGATG CTGACCCAAA GACAACTGGT CGGGGAGAGC CAGCAGAGCA TCTGCGTAAC  GTCTTCTACA GAATGGGCCT CAATGATCAG GATATCGTTG CATTGTCAGG TGCGCACACC ATGGGTCGCG TGCGCCAGGA CCGCAGCGGG TTTGGAGTGA AGGAAACAAA GTACACGAAG  GATGGCCCTG GCATCAAGGG TGGGCAGTCG TGGACCCCGG AGTGGCTGGT CTTTGACAAC TCGTACTTTG TGGAAGTGAA GGAGAAGAGG GATGCTGACC TGGTTGTGCT GCCAACTGAT  GCCGCTCTCT TCGAGGATGA TGGCTTCAAG CAGTACGCAG AGAAGTACGC AGTTGACCAG GAGGCGTTCT TCAAGGACTA TGCAGTCTCG CACAAGAAGC TGAGCGAGCT TGGGGCAAAA 
TGGAACCCTG AAGACGGGTT CTCCATCTAG 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCGCCGTACT GCAGACTCTG TCCCTGAGGT CGTCCCAGGC CGTGGCTTCC AGGTCTGCCC TCCAGGCTAG CAGCAAGTGC ATTGTACCCA AGGCATCCCG CGGTGTCCTG CATATTACCT  GCGAAACTGA TGTTGCAGCG ACGCCTCAAG TGGACCTTGA CACCAAGAAG AAGATCTACA GGGATTGCAA GCAGGCGGTG GAGCAGCTCA TCAAGGACAG GAACTGCAAC CCTATTATGA  TTCGCGCAGG CTGGCATGAT GCTGGCACGT ACAATGTGAA CATTGAGGAG TGGCCCCAGA GGGGTGGTAC AAATGGCAGC TTGCGATTCC CTATTGAGCA AGGCCATGGA GCTAACGCAG  GCATGGTTGT GGCTTACAAC CTGTTGAAGC CCATCAACAA GAAGTTCCCA GAAGTGACTT GGGCTGATCT TTTCCAAATG GCTGGCGCTG TGGCTATTGA GGTTGCGGGT GGACCTGCCA  TCGACATGAA GTATGGGCGG GTTGACACAA CTAGCGATGC TGATTGCCCG GAGTCTGGCA GGTTGCCCGA TGCTGACCCA AAGACAACTG GTCGGGGAGA GCCAGCAGAG CATCTGCGTA  ACGTCTTCTA CAGAATGGGC CTCAATGATC AGGATATCGT TGCATTGTCA GGTGCGCACA CCATGGGTCG CGTGCGCCAG GACCGCAGCG GGTTTGGAGT GAAGGAAACA AAGTACACGA  AGGATGGCCC TGGCATCAAG GGTGGGCAGT CGTGGACCCC GGAGTGGCTG GTCTTTGACA ACTCGTACTT TGTGGAAGTG AAGGAGAAGA GGGATGCTGA CCTGGTTGTG CTGCCAACTG  ATGCCGCTCT CTTCGAGGAT GATGGCTTCA AGCAGTACGC AGAGAAGTAC GCAGTTGACC AGGAGGCGTT CTTCAAGGAC TATGCAGTCT CGCACAAGAA GCTGAGCGAG CTTGGGGCAA  AATGGAACCC TGAAGACGGG TTCTCCATCT AGGTTGGGAC TTTGTGTACT ATATATCACT TGTCCTTCAA TCTGATTGTA GTGCCCGCTG CGCCTAACAG CCCAGCTGGC GGATTGCACT  TTTGTACGTA ATCTATTAGG CAAGCACATC TGGCTTTGAT TTGCGGTTAG TTCACTCAGA TGCTCTGGGC TTGCATCATC GTCTGAGTTG AGTCACATCC TTGCATATGG TTGTGACTGC 
GAGTATTGTG GTGCACTAGA T 

Retrieve as FASTA