Entry information : CatmAPx-R_UTEX2591
Entry ID 14386
Creation 2017-10-17 (Christophe Dunand)
Last sequence changes 2017-10-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2017-10-17 (Christophe Dunand)
Peroxidase information: CatmAPx-R_UTEX2591
Name CatmAPx-R_UTEX2591
Class Ascorbate peroxidase related     [Orthogroup: APx-R001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Chlorokybophyceae Chlorokybaceae Chlorokybus
Organism Chlorokybus atmophyticus     [TaxId: 3144 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CatmAPx-R_UTEX2591
start..stop
S start..stop
CatmAPx-R01 295 1e-99 144..289 220..365
CatmAPx-R01 152 5e-44 27..210 23..227
SaAPx-R01 179 5e-55 100..287 123..313
SmusAPx-R01 177 3e-54 122..288 132..299
AhalAPx-R01 177 6e-54 146..288 186..327
Literature and cross-references CatmAPx-R_UTEX2591
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO413285.1 [5' end]   HO425008.1 [3' end]
Protein sequence: CatmAPx-R_UTEX2591
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   30336.45  
PI (pH):   %s   10.21
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAAAAAPAG WLSVTSVSSS SWLSGGDASL RAERGSGLRS RKSRRYGAAT TAQASQPPKP QGQPQAVDVT RRSFIQRSSG LLLFMPAAAP VLTSLVARDG SNAARAVDAV RLRRSGVPKS  PEANAVLYAA LQSAIRETTS KGKAPSVxxx GGPAFRVPIG RVDAQVPDAE GRLPGENWTA AQLKSHFAAQ GFSTRELVAL LGAHTIGFKG YGMPDVFDNT YYKTLLEKPW KNSKDAMAYM 
IGIPIDHAVA EDTECLQWIQ LYAADQQQFF NDFTAAYTKM TSAGAMWSV 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs, no overlap between both (80 aa are missing)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGCGG CGGCGGCGGC GCCAGCGGGG TGGCTGTCGG TGACGTCGGT ATCGTCGTCG AGCTGGCTGT CTGGGGGGGA TGCCAGCTTG CGGGCTGAGA GGGGTTCTGG GCTGAGGAGT  AGAAAATCGC GGCGATATGG CGCAGCGACC ACCGCGCAGG CTTCCCAGCC TCCCAAGCCT CAGGGTCAGC CTCAAGCTGT TGATGTGACG AGGAGGAGTT TCATACAACG CAGCAGCGGC  TTGCTGCTAT TCATGCCGGC CGCTGCCCCT GTTTTGACTT CGCTTGTCGC ACGCGACGGC AGCAATGCTG CTCGCGCTGT CGATGCCGTC CGTCTCCGAC GGTCGGGCGT GCCGAAGTCG  CCCGAAGCAA ATGCAGTGCT GTATGCGGCA TTGCAATCGG CAATCCGAGA GACCACAAGC AAGGGCAAGG CGCCGAGCGT Gnnnnnnnnn GGCGGGCCGG CCTTCCGCGT ACCTATCGGC  AGAGTTGATG CACAGGTGCC AGATGCGGAG GGTCGCTTGC CAGGCGAGAA CTGGACGGCA GCACAGCTGA AGTCGCATTT CGCCGCACAG GGTTTCAGCA CGCGCGAGTT GGTTGCGTTG  TTGGGTGCGC ACACTATCGG GTTTAAGGGT TACGGGATGC CGGACGTGTT TGACAACACG TATTACAAGA CGCTGTTGGA GAAGCCTTGG AAAAACAGCA AAGATGCAAT GGCATATATG  ATTGGCATAC CCATCGACCA TGCGGTTGCT GAGGACACGG AGTGCTTACA ATGGATTCAG CTGTATGCGG CCGATCAGCA GCAGTTTTTC AATGATTTCA CTGCTGCGTA TACGAAGATG 
ACGTCTGCAG GAGCTATGTG GTCGGTTTGA 

Retrieve as FASTA