Entry information : Ha4CxxC04HanXRQChr04g0115621
Entry ID 14392
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: Ha4CxxC04HanXRQChr04g0115621
Name Ha4CxxC04HanXRQChr04g0115621
Class 4CxxC Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ha4CxxC04
start..stop
S start..stop
Ha4CxxC10 271 6e-94 1..147 1..147
Thas4CxxC11-2 140 4e-42 8..147 16..182
Thas4CxxC11-3 139 7e-42 3..147 13..182
At4CxxC11 135 2e-40 15..144 24..175
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 132971888..132972367 480  
join(132971888..132972367)


exon

Literature and cross-references Ha4CxxC04HanXRQChr04g0115621
DNA ref. HanXRQ genome:   HanXRQChr04 (132971888..132972367)
Protein sequence: Ha4CxxC04HanXRQChr04g0115621
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   160
PWM (Da):   %s   18161.29  
PI (pH):   %s   10.04
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MIGSYDPKSS SSPIFNRSYS IHSTPTDSTK PNPNSSLQRS DSVKNFPDSI KGKVKSLCSI FEARRVPKSK TRTKLKPEKL ISSNESSAIR LAGTEDRVVI YFTSLRGIRR TYEDCYAVRM 
ILKFFRVYID ERDVSMDSAY RNELLNISVD HHHTREGCLF 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCTATGACCC CAAATCATCA TCTTCCCCAA TCTTCAACCG ATCGTACAGT ATTCACTCTA CACCCACTGA TTCCACAAAA CCTAACCCTA ATTCTTCACT CCAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGTACC AAAATCCAAA ACGCGAACGA AACTGAAACC AGAAAAGTTA  ATTTCATCAA ACGAATCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TATTAAACAT CTCCGTCGAC CACCACCACA CGAGAGAGGG GTGCTTGTTT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCTATGACCC CAAATCATCA TCTTCCCCAA TCTTCAACCG ATCGTACAGT ATTCACTCTA CACCCACTGA TTCCACAAAA CCTAACCCTA ATTCTTCACT CCAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGTACC AAAATCCAAA ACGCGAACGA AACTGAAACC AGAAAAGTTA  ATTTCATCAA ACGAATCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TATTAAACAT CTCCGTCGAC CACCACCACA CGAGAGAGGG GTGCTTGTTT 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCTATGACCC CAAATCATCA TCTTCCCCAA TCTTCAACCG ATCGTACAGT ATTCACTCTA CACCCACTGA TTCCACAAAA CCTAACCCTA ATTCTTCACT CCAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGTACC AAAATCCAAA ACGCGAACGA AACTGAAACC AGAAAAGTTA  ATTTCATCAA ACGAATCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TATTAAACAT CTCCGTCGAC CACCACCACA CGAGAGAGGG GTGCTTGTTT 
TGA 

Retrieve as FASTA