Entry information : Ha4CxxC10 (HanXRQChr11g0341821)
Entry ID 14398
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: Ha4CxxC10 (HanXRQChr11g0341821)
Name (synonym) Ha4CxxC10 (HanXRQChr11g0341821)
Class 4CxxC Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ha4CxxC10
start..stop
S start..stop
Thas4CxxC11-2 286 4e-98 3..243 13..276
Ha4CxxC04 277 3e-96 1..147 1..147
Thas4CxxC11-3 279 2e-95 3..243 13..276
Thas4CxxC11-1 274 3e-93 9..243 19..276
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 120232954..120233694 741  
complement(join(120232954..120233694))


exon

Literature and cross-references Ha4CxxC10 (HanXRQChr11g0341821)
DNA ref. HanXRQ genome:   HanXRQChr11 (120233694..120232954)
Protein sequence: Ha4CxxC10 (HanXRQChr11g0341821)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   246
PWM (Da):   %s   27272.81  
PI (pH):   %s   9.14
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MIGSDDPKSS SSSIFNRSYT IHSTPTDSTK PNPNSSLQRS DSVKNFPDSI KGKVKSLCSI FEARRAPKSK TQTKLKPEKS ISSNGPSAIR LAGTEDRVVI YFTSLRGIRR TYEDCYAVRM  ILKFFRVYID ERDVSMDSAY RNELLNVLRV KQVTLPQVFI KGEYVGGADV IRQLHETGQL AKVLTGVRVR STGAWQVCDA CGDVRFMPCA NCSGSKKVLD EDEDRLVRCP DCNENGLVRC 
PLCSSS 

Retrieve as FASTA  
Remarks
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCGATGACCC CAAATCATCA TCTTCCTCAA TCTTCAACCG ATCGTACACT ATTCACTCTA CACCCACCGA TTCCACAAAA CCTAACCCTA ATTCTTCACT ACAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGCACC AAAATCCAAA ACGCAAACGA AATTGAAACC AGAAAAGTCA  ATTTCATCAA ACGGACCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TGTTAAACGT GTTGCGTGTG AAGCAAGTTA CCTTGCCTCA GGTGTTTATC  AAGGGGGAGT ATGTTGGTGG TGCTGACGTC ATCAGGCAGT TACATGAGAC TGGCCAGCTG GCGAAGGTGT TGACCGGGGT TCGGGTTAGG TCAACCGGGG CGTGGCAGGT GTGTGACGCG  TGTGGGGATG TTAGGTTCAT GCCGTGCGCG AATTGTAGTG GGAGTAAGAA GGTGTTAGAT GAAGATGAAG ATCGGTTGGT GAGGTGTCCT GACTGTAACG AAAACGGGCT GGTTCGTTGC 
CCTCTATGTT CTTCGTCTTG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCGATGACCC CAAATCATCA TCTTCCTCAA TCTTCAACCG ATCGTACACT ATTCACTCTA CACCCACCGA TTCCACAAAA CCTAACCCTA ATTCTTCACT ACAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGCACC AAAATCCAAA ACGCAAACGA AATTGAAACC AGAAAAGTCA  ATTTCATCAA ACGGACCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TGTTAAACGT GTTGCGTGTG AAGCAAGTTA CCTTGCCTCA GGTGTTTATC  AAGGGGGAGT ATGTTGGTGG TGCTGACGTC ATCAGGCAGT TACATGAGAC TGGCCAGCTG GCGAAGGTGT TGACCGGGGT TCGGGTTAGG TCAACCGGGG CGTGGCAGGT GTGTGACGCG  TGTGGGGATG TTAGGTTCAT GCCGTGCGCG AATTGTAGTG GGAGTAAGAA GGTGTTAGAT GAAGATGAAG ATCGGTTGGT GAGGTGTCCT GACTGTAACG AAAACGGGCT GGTTCGTTGC 
CCTCTATGTT CTTCGTCTTG A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCGGTT CCGATGACCC CAAATCATCA TCTTCCTCAA TCTTCAACCG ATCGTACACT ATTCACTCTA CACCCACCGA TTCCACAAAA CCTAACCCTA ATTCTTCACT ACAACGCTCC  GATTCCGTCA AGAACTTCCC CGATTCAATC AAAGGCAAAG TCAAGAGCCT ATGCAGCATA TTCGAAGCTC GTAGGGCACC AAAATCCAAA ACGCAAACGA AATTGAAACC AGAAAAGTCA  ATTTCATCAA ACGGACCGTC TGCAATTCGA TTAGCTGGAA CAGAGGATCG TGTGGTGATC TACTTCACGA GCTTACGTGG AATCCGAAGA ACGTACGAAG ATTGTTACGC AGTAAGAATG  ATTTTGAAGT TCTTTAGGGT TTATATCGAC GAACGAGATG TTTCAATGGA CTCTGCGTAT AGAAATGAGT TGTTAAACGT GTTGCGTGTG AAGCAAGTTA CCTTGCCTCA GGTGTTTATC  AAGGGGGAGT ATGTTGGTGG TGCTGACGTC ATCAGGCAGT TACATGAGAC TGGCCAGCTG GCGAAGGTGT TGACCGGGGT TCGGGTTAGG TCAACCGGGG CGTGGCAGGT GTGTGACGCG  TGTGGGGATG TTAGGTTCAT GCCGTGCGCG AATTGTAGTG GGAGTAAGAA GGTGTTAGAT GAAGATGAAG ATCGGTTGGT GAGGTGTCCT GACTGTAACG AAAACGGGCT GGTTCGTTGC 
CCTCTATGTT CTTCGTCTTG A 

Retrieve as FASTA