Entry information : HaROXY01HanXRQChr01g0001461
Entry ID 14437
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY01HanXRQChr01g0001461
Name HaROXY01HanXRQChr01g0001461
Class ROXY Grx    [Orthogroup: ROXY001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY01
start..stop
S start..stop
HaROXY03 202 6e-70 1..101 1..101
HaROXY02 200 4e-69 1..101 1..101
HaROXY04 199 1e-68 1..101 1..101
HaROXY27 182 6e-62 1..101 1..100
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4451991..4452296 306  
complement(join(4451991..4452296))


exon

Literature and cross-references HaROXY01HanXRQChr01g0001461
DNA ref. HanXRQ genome:   HanXRQChr01 (4452296..4451991)
Protein sequence: HaROXY01HanXRQChr01g0001461
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101
PWM (Da):   %s   10975.77  
PI (pH):   %s   7.29
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEKIQSLTSH NGVVIFTKST CCLCYAVTVL FQELRVNPIV YEIDQDPEGR EMEKALLKKG CSSLVPAVFI GGKLVGSTNE VMSLHLSGSL IPLLKPYQLL S 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC TTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCCTA TCAGCTACTT TCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC TTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCCTA TCAGCTACTT TCTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC TTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCCTA TCAGCTACTT TCTTAA 

Retrieve as FASTA