Entry information : HaROXY02HanXRQChr01g0001491
Entry ID 14438
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY02HanXRQChr01g0001491
Name HaROXY02HanXRQChr01g0001491
Class ROXY Grx    [Orthogroup: ROXY003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY02
start..stop
S start..stop
HaROXY03 204 2e-70 1..101 1..101
HaROXY01 200 4e-69 1..101 1..101
HaROXY04 200 5e-69 1..101 1..101
HaROXY27 179 8e-61 1..101 1..100
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4503943..4504248 306  
complement(join(4503943..4504248))


exon

Literature and cross-references HaROXY02HanXRQChr01g0001491
DNA ref. HanXRQ genome:   HanXRQChr01 (4504248..4503943)
Protein sequence: HaROXY02HanXRQChr01g0001491
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101
PWM (Da):   %s   10971.78 Transmb domain:   %s   i7-29o
PI (pH):   %s   7.29
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEKIQSLTSH NGVVIFTKSI CCLCYAVTVL FQELRVNPIV YEIDQDPEGR EMEKALLKKG CSSPVPAVFI GGKLVGSTNE VMSLHLSGSL IPLLKPYQLL S 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCATA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCATA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCATA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA