Entry information : HaROXY03HanXRQChr01g0001501
Entry ID 14439
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY03HanXRQChr01g0001501
Name HaROXY03HanXRQChr01g0001501
Class ROXY Grx    [Orthogroup: ROXY001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY03
start..stop
S start..stop
HaROXY02 204 2e-70 1..101 1..101
HaROXY04 202 6e-70 1..101 1..101
HaROXY01 202 6e-70 1..101 1..101
HaROXY27 181 1e-61 1..101 1..100
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4536505..4536810 306  
complement(join(4536505..4536810))


exon

Literature and cross-references HaROXY03HanXRQChr01g0001501
DNA ref. HanXRQ genome:   HanXRQChr01 (4536810..4536505)
Protein sequence: HaROXY03HanXRQChr01g0001501
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101
PWM (Da):   %s   10959.74  
PI (pH):   %s   7.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEKIQSLTSH NGVVIFTKST CCLCYAVTVL FQELRVNPIV YEIDQDPEGR EMEKALLKKG CSSPVPAVFI GGKLVGSTNE VMSLHLSGSL IPLLKPYQLL S 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGATCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTGGGCTC CACCAATGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCGCTGC TGAAACCCTA TCAGTTACTT TCTTAA 

Retrieve as FASTA