Entry information : HaROXY04HanXRQChr01g0001521
Entry ID 14440
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaROXY04HanXRQChr01g0001521
Name HaROXY04HanXRQChr01g0001521
Class ROXY Grx    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaROXY04
start..stop
S start..stop
HaROXY03 202 6e-70 1..101 1..101
HaROXY02 200 5e-69 1..101 1..101
HaROXY01 199 1e-68 1..101 1..101
HaROXY27 180 3e-61 1..101 1..100
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4630977..4631282 306  
complement(join(4630977..4631282))


exon

Literature and cross-references HaROXY04HanXRQChr01g0001521
DNA ref. HanXRQ genome:   HanXRQChr01 (4631282..4630977)
Protein sequence: HaROXY04HanXRQChr01g0001521
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   101
PWM (Da):   %s   10943.78  
PI (pH):   %s   7.94
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEKIQSLTSH NGVVIFTKST CCLCYAVTVL FQELRVNPIV YEIDQVPEGR EMEKALLKKG CSSPVPAVFI GGKLVGSTNE VMSLHLSGSL IPLLKPYQLL S 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGTTCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTCGGCTC CACCAACGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCATA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGTTCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTCGGCTC CACCAACGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCATA TCAGTTACTT TCTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA TACAATCATT GACATCACAC AATGGAGTTG TGATTTTCAC AAAGAGCACA TGTTGTTTGT GTTATGCTGT CACTGTTCTG TTCCAAGAAC TTAGGGTCAA CCCTATAGTT  TATGAAATAG ATCAAGTTCC TGAAGGAAGG GAGATGGAGA AAGCTCTTCT TAAAAAAGGG TGTAGCTCAC CTGTGCCAGC TGTATTCATA GGTGGCAAGC TTGTCGGCTC CACCAACGAG 
GTCATGTCCC TCCACCTAAG TGGCTCCCTC ATTCCACTGC TGAAACCATA TCAGTTACTT TCTTAA 

Retrieve as FASTA